Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00026 | ATGGGGTTGTACTCGAGTTTGATGGAGGCGATTGAGGCCTACACAGGCTTATCTCCCATGGCGTTCTTCACGATCCTGGTTCTGATGGTCGGCATTTACCGACTGGTTTGTGGGATGTTCGTCGTCCCTGAAGATTTTAAGGCCTTACAGTCCAGTTATCTTCATCAAACAATGGGTTCCTCGGCGTCCTCCTCGTTGCCTGTTGCTGATCCCGTTCAGTTGGGAGACGTTACTGAGGAAGAACTCAGAGCTTATAACGGTTCAGATCCCAAGAAACCTTTGTTGATGGCCATCAAAGGTCAGATCTACGATGTTTCCAGGTCCAGGATGTTTTATGGTCCTGGTGGGCCCTATGCCTTGTTTGCTGGGAGGGATGCGAGCCGAGCCTTAGCTCTAATGTCCTTCGACCCGAATGACCTTACAGGAAATACAGATGGTCTGGAACCATCTGAGCTTGAAGTTTTACAGGACTGGGAGTATAAATTCATGGAGAAATATGTAAAGGTCGGGCAGCTTGTTACAAGGGCTGAGGACAGTGGGGGTCAAGAGAAAATAGAGGAGAAGAGTCAAGTGGGAGATATCATCAGCCAAGATTTGAACGGCAAAGCTGCGGGAACTGAAGCAGGAACCATATGA | 636 | 48.74 | MGLYSSLMEAIEAYTGLSPMAFFTILVLMVGIYRLVCGMFVVPEDFKALQSSYLHQTMGSSASSSLPVADPVQLGDVTEEELRAYNGSDPKKPLLMAIKGQIYDVSRSRMFYGPGGPYALFAGRDASRALALMSFDPNDLTGNTDGLEPSELEVLQDWEYKFMEKYVKVGQLVTRAEDSGGQEKIEEKSQVGDIISQDLNGKAAGTEAGTI | 211 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00026 | 211 | SMART | Cyt-b5-2 | 77 | 173 | IPR001199 | - | |
| Eupl1g00026 | 211 | Gene3D | - | 75 | 174 | IPR036400 | - | |
| Eupl1g00026 | 211 | PANTHER | MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED | 5 | 186 | IPR050577 | GO:0005783(PANTHER)|GO:0012505(PANTHER)|GO:0016020(PANTHER) | |
| Eupl1g00026 | 211 | FunFam | Membrane steroid-binding protein 1 | 75 | 173 | - | - | |
| Eupl1g00026 | 211 | Pfam | Cytochrome b5-like Heme-Steroid binding domain | 78 | 172 | IPR001199 | - | |
| Eupl1g00026 | 211 | SUPERFAMILY | Cytochrome b5-like heme-steroid binding domain | 72 | 173 | IPR036400 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00026 | K17278 | membrane-associated progesterone receptor component |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2195107 | Eupl | Eupl12g00601 | Eupl-Chr12:20090792 | Eupl1g00026 | Eupl-Chr1:983372 | |
| 2197786 | Eupl | Eupl1g00026 | Eupl-Chr1:983372 | Eupl9g01193 | Eupl-Chr9:23607004 | |
| 2210413 | Eupl | Eupl1g00026 | Eupl-Chr1:983372 | Eupl14g00504 | Eupl-Chr14:6214485 | |
| 2214122 | Eupl | Eupl1g00026 | Eupl-Chr1:983372 | Eupl14g00536 | Eupl-Chr14:6633747 |