Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00027 | ATGCCAACTCGGAGGACTGCTTTCTTCGTGAATATGTATGCATTCTTCTGTGGCGGCTTTGGTCTTGCCGGCTTTGGGTTCATCCTTCGTGACTCCCACTCAAATTGTTTATTGGCAGGGGGAACCAAATCCAATGCCAAATCAGCCGAAGAAGCCGAGGTTTCTCTCTTTTGTGCGGCGGACATTGTGGTAGAAATGGACGCGTTTGTCGTGGTGACTAGTCTGAACGATGGCTCGGTGGCTCTCTCTCTCCGATCCATAGCCCCAGCGGCTGATATTTTGCATTACAAACTCTCTTTCTCTTCTCCTACTTTTCGGTATATCCCCAGATCGGCAAACTCTGTTGCACATACTATTGCCTCTTAA | 366 | 48.63 | MPTRRTAFFVNMYAFFCGGFGLAGFGFILRDSHSNCLLAGGTKSNAKSAEEAEVSLFCAADIVVEMDAFVVVTSLNDGSVALSLRSIAPAADILHYKLSFSSPTFRYIPRSANSVAHTIAS | 121 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00027 | 121 | Pfam | Reverse transcriptase-like | 21 | 120 | IPR002156 | GO:0003676(InterPro)|GO:0004523(InterPro) | |
| Eupl1g00027 | 121 | PANTHER | BNAC02G40300D PROTEIN | 11 | 120 | IPR052929 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00027 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2197787 | Eupl | Eupl1g00027 | Eupl-Chr1:996739 | Eupl9g01276 | Eupl-Chr9:25421100 | |
| 2210414 | Eupl | Eupl1g00027 | Eupl-Chr1:996739 | Eupl11g01558 | Eupl-Chr11:27077477 |