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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00027 ATGCCAACTCGGAGGACTGCTTTCTTCGTGAATATGTATGCATTCTTCTGTGGCGGCTTTGGTCTTGCCGGCTTTGGGTTCATCCTTCGTGACTCCCACTCAAATTGTTTATTGGCAGGGGGAACCAAATCCAATGCCAAATCAGCCGAAGAAGCCGAGGTTTCTCTCTTTTGTGCGGCGGACATTGTGGTAGAAATGGACGCGTTTGTCGTGGTGACTAGTCTGAACGATGGCTCGGTGGCTCTCTCTCTCCGATCCATAGCCCCAGCGGCTGATATTTTGCATTACAAACTCTCTTTCTCTTCTCCTACTTTTCGGTATATCCCCAGATCGGCAAACTCTGTTGCACATACTATTGCCTCTTAA 366 48.63 MPTRRTAFFVNMYAFFCGGFGLAGFGFILRDSHSNCLLAGGTKSNAKSAEEAEVSLFCAADIVVEMDAFVVVTSLNDGSVALSLRSIAPAADILHYKLSFSSPTFRYIPRSANSVAHTIAS 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00027 121 Pfam Reverse transcriptase-like 21 120 IPR002156 GO:0003676(InterPro)|GO:0004523(InterPro)
Eupl1g00027 121 PANTHER BNAC02G40300D PROTEIN 11 120 IPR052929 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00027 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197787 Eupl Eupl1g00027 Eupl-Chr1:996739 Eupl9g01276 Eupl-Chr9:25421100
2210414 Eupl Eupl1g00027 Eupl-Chr1:996739 Eupl11g01558 Eupl-Chr11:27077477