AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00028 ATGAATCGCAGTTTTAGGGCTCAGGAATCACAAATGCAAGCTGCTGTACAGCAGAGGCAGCAAGGGAGAAACCACGTGGGAACACTGATGAAGGAGAAGGAAGAGGAGCTCGCTTTGTTTCTCGAGATGCGGAAACGCGAGAAGGAACGGAACAATCTTCTTCTTCTTCTTCACAATTCGGAAGAGTTTGATACTCCATTAGGATCTAAACCAGGCACTTCTCCAATATTCAAGATTGTTTCATCTACGCCTCCACGCAAGACACCTGCTGATGATTTCCTAAATTCCGAGAGTGATAAAAATGATTATGATTGGCTTCTGACACCGCCCGGCACTCCTCTTTTTCCTTCTTTGGAGATGGAATCACAAAAAACTGTTATGAGTCAGATTGGAACTCCTAAAACTCGTCCCCCTGCACTGAAATCTAGGGTTCTTATTCTCAAGTTACCTATTCATGCTGCCAAGTCATTAAATCTATTGTGGTTGCAGTTAGCAATTCCCCAGGTGGAGCTTGGTTCGAGGAGCAACCTAGTATCTAAGCAACCAACTTTATCCCCTGGGTTGAACTCTTCCAGTGCAGGAACTCGCAGGCCCTTGTCATCAGGGGGCCGAGAAGTATCTAAGCAACCAATTTTGTCCCCTGGGTTGAACTCTTCCAGTGGAGGAATTCGCAGACCTTCATCATCAGGGGGTCCAGGTTCAACTGCATCTAGACCAGCAACTCCAACCAGACGCCCCACATTATCTGCCACGGCTAAACCGTCAAGACCTTCCACTCCTACTTCAAGGGCCACCTTACCTTCCTCTAAGCCGATGGCTCCTCCAGCAAGATTCTCAAACCCTTCTGCAAGATCTTCTACACCAACAGCCAGGCCCACTGTACCGGCATCCAAGTCCACATCAAGGTCAGCGACACCAACTCGGCGGCCGTCAACCCCATCAAGTGTATCTAGCGTATCTGCTCCTCCTGGTCGGTCTTCTTCAGTAACCAAGACAGGTCCCACAACAATGAGAAATCCAGTGCCATCACGAGGCAGTTCTCCAACAGTAAAATCCAGACCATGGAAGCCCTCAGAGATGCCTGGTTTCTCACTTGATGCCCCCCCTAATTTAAGGACATCAATGCCCGAAAGGCCGGTTTCTGCCTCCAGGGGAAGGCCTGGAGCACCTAGTGCTAGATCCTCTTCTGTTGAGGCTGGTTCTAATGGAAGGCCAAGAAGGCAGTCATGCTCTCCGTCGAGAGGACGGGCTCCAAATGGCAGTATCCACAGCAGCGGGAGCTCTGTTCCTGCAGTTAGTCGAGCACATTCCAATGGTAGTGACAATGTGAGCCCTGTTCTTATGGGAACCAAGATGGTTGAAAGGGTGGTGAACATGCGGAAACTGGCACCGCCGAAGCAAGATGGCCAACGCTCTGCCCATAATAACCCCGTAGGGAAGCCATCTTCATCCCCGGAGAGCTTGGGCTTTGGAAGAACGCTCTCCAAGAAATCTTTAGATATGGCACTGAGGCATATGGATATAAGGCGAAGCATTCCAGGTAGCCTACGCCCATTGATGACAAACATTCCAGCTTCCTCGATGTACAGTGTGAGATCGGGACCGGCAAGAAGCAGGACAGTTAGTGTTTCAGACTCTCCTCTTGCCACGAGCAGTAATGCCAGTTCCGAGCAGAGCGTCAATGACAATACCCTTTGTTTGAACACAAGTGAAGTAGTAGATTATGATCTTGGCAGTGAGAGAGGAGGTAGATCCTCTCCTGCAAGCCAGTGTGGCAGGTGA 1782 49.83 MNRSFRAQESQMQAAVQQRQQGRNHVGTLMKEKEEELALFLEMRKREKERNNLLLLLHNSEEFDTPLGSKPGTSPIFKIVSSTPPRKTPADDFLNSESDKNDYDWLLTPPGTPLFPSLEMESQKTVMSQIGTPKTRPPALKSRVLILKLPIHAAKSLNLLWLQLAIPQVELGSRSNLVSKQPTLSPGLNSSSAGTRRPLSSGGREVSKQPILSPGLNSSSGGIRRPSSSGGPGSTASRPATPTRRPTLSATAKPSRPSTPTSRATLPSSKPMAPPARFSNPSARSSTPTARPTVPASKSTSRSATPTRRPSTPSSVSSVSAPPGRSSSVTKTGPTTMRNPVPSRGSSPTVKSRPWKPSEMPGFSLDAPPNLRTSMPERPVSASRGRPGAPSARSSSVEAGSNGRPRRQSCSPSRGRAPNGSIHSSGSSVPAVSRAHSNGSDNVSPVLMGTKMVERVVNMRKLAPPKQDGQRSAHNNPVGKPSSSPESLGFGRTLSKKSLDMALRHMDIRRSIPGSLRPLMTNIPASSMYSVRSGPARSRTVSVSDSPLATSSNASSEQSVNDNTLCLNTSEVVDYDLGSERGGRSSPASQCGR 593
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00028 593 MobiDBLite consensus disorder prediction 530 570 - -
Eupl1g00028 593 Coils Coil 30 51 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 388 445 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 211 268 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 1 23 - -
Eupl1g00028 593 PANTHER GASTRIC MUCIN-LIKE PROTEIN 27 571 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Eupl1g00028 593 MobiDBLite consensus disorder prediction 182 198 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 530 593 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 469 491 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 462 492 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 182 447 - -
Eupl1g00028 593 MobiDBLite consensus disorder prediction 279 353 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00028 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197788 Eupl Eupl1g00028 Eupl-Chr1:1007102 Eupl1g01096 Eupl-Chr1:30596043
2210415 Eupl Eupl1g00028 Eupl-Chr1:1007102 Eupl5g02085 Eupl-Chr5:47006829