AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00033 | ATGTTTTTCTTTTTTAGTTTAACTAGTAGAATGGAGGGAGTACTTGAAAGTACTGGAAAAACGTTAACAGTGACAAAGTCGGAACCCATCTTTGTCCGTCCTGCCATTGAAACTGACCATGGCTTCTGCTTCCTGTCGAATCTCGACCAGTACCTGGACTTTTTCCTTGAGGTGTTGTTCTGTTTCAAGGCAGATGAGAGAAAGAGAAATGAAAATGCTAGTGAAGTGCTCATGAACGCCTTGGCTAAGGTCTTGGTTTATTACTATCCGCTTGCCGGGATTCTTACGACTGATTCTGATGGGAGGCTAACTGTGAGGTGCACAGGACATGGTGTACCGTTTGTTGAAGCAGTTGTAGACTGTGAGATTGAAAAATTAGGCGACATCATCAACGTGCGTGATCCTGTGACATTGAGAAAGTTTGTTCATATATTGCCTGAAGAAAGGAGCACTTTAGAAATGCCTCTATTGACTATCCAGGTCACAAGGTTCAAGTGTGGAGGGCTTGTCGTTGGAGTAGCAAACAACCACTGTATAGCTGATGGGTTAGCTATGATGGAGTTTATAACTTCATGGGCTGAAATTGCTAGAGGTTTACAATTATCTGTCACACCATTTCTAGATAGAGAAATATTGAGATCCAAACAACCTCCTAAGATAGAATTTCCTCACTGTGAGTACTCAGTGATAGACGCCGAGCCAGATGCCATCGCTAATTCCGAAGAAGAACAACTGCTGGTTAGCTCTTTCTGTTTCACTGAAGAAAGGCTGGCCCATTTAAAAGAAATTGCCATGGAAGATGGGGTCGTAAAGAGCTGCACAAACTTCACAGTCCTCACAGCATTTATATGGCGCGCTCGGACCAAATCCCTTAAGATGAAACCTGACCAACAGACAAAGCTTCTCATCCCTGTTGATGGGCGATCTAAATTCGATCCGCCCTTGCCAAAAGGGTACTTTGGCAATGCCATCCTTCTCATGTCCTGCCATTGTAATGCAAGAGAATTGATAGAAAAGCCATTCTCTTTCACAGTTAAATTGGTGCAAGAAGCCATCAAATTGGTCACAGAAGACTATATCAGATCATCTATCGACTACTTCGAAGTTACGAAACCGATGCTAACATTGACACCGGCCACCGTTTGTTATCAGTACATGGACAAGACTACCCGTTGA | 1176 | 43.2 | MFFFFSLTSRMEGVLESTGKTLTVTKSEPIFVRPAIETDHGFCFLSNLDQYLDFFLEVLFCFKADERKRNENASEVLMNALAKVLVYYYPLAGILTTDSDGRLTVRCTGHGVPFVEAVVDCEIEKLGDIINVRDPVTLRKFVHILPEERSTLEMPLLTIQVTRFKCGGLVVGVANNHCIADGLAMMEFITSWAEIARGLQLSVTPFLDREILRSKQPPKIEFPHCEYSVIDAEPDAIANSEEEQLLVSSFCFTEERLAHLKEIAMEDGVVKSCTNFTVLTAFIWRARTKSLKMKPDQQTKLLIPVDGRSKFDPPLPKGYFGNAILLMSCHCNARELIEKPFSFTVKLVQEAIKLVTEDYIRSSIDYFEVTKPMLTLTPATVCYQYMDKTTR | 391 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00033 | 391 | PANTHER | TRICHOTHECENE 3-O-ACETYLTRANSFERASE | 24 | 375 | IPR050317 | GO:0016747(PANTHER) | |
| Eupl1g00033 | 391 | Gene3D | - | 18 | 229 | IPR023213 | - | |
| Eupl1g00033 | 391 | Gene3D | - | 230 | 387 | IPR023213 | - | |
| Eupl1g00033 | 391 | Pfam | Transferase family | 23 | 377 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00033 | K15400 | omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2193662 | Eupl | Eupl11g00145 | Eupl-Chr11:1990594 | Eupl1g00033 | Eupl-Chr1:1144320 | |
| 2197791 | Eupl | Eupl1g00033 | Eupl-Chr1:1144320 | Eupl9g01223 | Eupl-Chr9:24244327 | |
| 2210416 | Eupl | Eupl1g00033 | Eupl-Chr1:1144320 | Eupl4g00218 | Eupl-Chr4:3572267 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Eupl11g00326 | . | 72 | 127 | AT gene family | AT5G57840 | 43.103 | 1.44e-07 | 44.3 | |
| Eupl11g00281 | . | 1 | 428 | AT gene family | AT5G48930 | 25.85 | 2.35e-33 | 128.0 | |
| Eupl11g00145 | . | 7 | 430 | AT gene family | AT5G48930 | 34.499 | 3.56e-84 | 263.0 | |
| Eupl11g01111 | . | 6 | 433 | AT gene family | AT5G48930 | 28.989 | 4.00e-46 | 165.0 | |
| Eupl1g00033 | . | 11 | 362 | AT gene family | AT5G48930 | 35.211 | 4.86e-70 | 224.0 | |
| Eupl3g00110 | . | 30 | 202 | AT gene family | AT1G03940 | 29.282 | 3.35e-10 | 57.4 | |
| Eupl3g00111 | . | 25 | 155 | AT gene family | AT2G19070 | 32.168 | 9.02e-08 | 48.9 | |
| Eupl3g00124 | . | 56 | 286 | AT gene family | AT5G48930 | 28.226 | 6.99e-18 | 83.6 | |
| Eupl3g01189 | . | 56 | 428 | AT gene family | AT5G48930 | 30.198 | 4.96e-35 | 133.0 | |
| Eupl3g01188 | . | 56 | 428 | AT gene family | AT5G48930 | 31.172 | 1.65e-38 | 143.0 | |
| Eupl3g01187 | . | 55 | 428 | AT gene family | AT5G48930 | 29.949 | 2.96e-38 | 142.0 | |
| Eupl3g01185 | . | 55 | 387 | AT gene family | AT5G48930 | 31.818 | 1.31e-37 | 140.0 | |
| Eupl3g01184 | . | 116 | 356 | AT gene family | AT5G48930 | 29.6 | 7.86e-25 | 99.8 | |
| Eupl8g01319 | . | 2 | 414 | AT gene family | AT5G57840 | 27.356 | 6.33e-27 | 110.0 | |
| Eupl8g01337 | . | 114 | 430 | AT gene family | AT5G57840 | 27.523 | 2.31e-28 | 117.0 | |
| Eupl8g01338 | . | 142 | 426 | AT gene family | AT5G48930 | 26.51 | 1.76e-22 | 95.1 | |
| Eupl8g01339 | . | 92 | 300 | AT gene family | AT5G48930 | 30.233 | 4.37e-22 | 91.7 | |
| Eupl3g01911 | . | 1 | 428 | AT gene family | AT5G48930 | 31.121 | 6.62e-60 | 199.0 | |
| Eupl6g00479 | . | 1 | 428 | AT gene family | AT5G48930 | 32.373 | 1.27e-65 | 214.0 | |
| Eupl4g00411 | . | 1 | 428 | AT gene family | AT5G48930 | 26.116 | 6.76e-32 | 124.0 | |
| Eupl4g00218 | . | 7 | 430 | AT gene family | AT5G48930 | 36.597 | 9.62e-89 | 275.0 | |
| Eupl9g00772 | . | 25 | 427 | AT gene family | AT5G48930 | 26.824 | 4.16e-39 | 145.0 | |
| Eupl12g00169 | . | 1 | 433 | AT gene family | AT5G48930 | 29.13 | 4.95e-56 | 190.0 | |
| Eupl9g00520 | . | 9 | 451 | AT gene family | AT2G19070 | 49.099 | 2.65e-160 | 459.0 | |
| Eupl9g00519 | . | 4 | 451 | AT gene family | AT2G19070 | 48.222 | 2.54e-162 | 464.0 | |
| Eupl9g00518 | . | 9 | 451 | AT gene family | AT2G19070 | 49.327 | 3.28e-159 | 456.0 | |
| Eupl1g01017 | . | 3 | 430 | AT gene family | AT5G48930 | 28.412 | 3.22e-43 | 155.0 | |
| Eupl1g01130 | . | 55 | 427 | AT gene family | AT5G48930 | 24.941 | 1.28e-31 | 124.0 | |
| Eupl1g01371 | . | 1 | 433 | AT gene family | AT5G48930 | 34.978 | 5.90e-72 | 231.0 | |
| Eupl9g01223 | . | 1 | 432 | AT gene family | AT5G48930 | 61.894 | 0.0 | 555.0 | |
| Eupl9g01165 | . | 14 | 427 | AT gene family | AT5G48930 | 25.74 | 4.84e-31 | 122.0 | |
| Eupl10g00696 | . | 1 | 398 | AT gene family | AT2G19070 | 25.18 | 1.34e-23 | 100.0 | |
| Eupl10g00736 | . | 3 | 433 | AT gene family | AT5G48930 | 30.31 | 3.67e-50 | 174.0 | |
| Eupl8g00278 | . | 25 | 427 | AT gene family | AT5G48930 | 28.638 | 4.15e-42 | 152.0 | |
| Eupl3g01547 | . | 1 | 431 | AT gene family | AT5G48930 | 32.589 | 9.39e-65 | 214.0 | |
| Eupl14g00932 | . | 10 | 460 | AT gene family | AT1G03495 | 35.805 | 1.03e-89 | 279.0 | |
| Eupl14g00397 | . | 56 | 428 | AT gene family | AT5G48930 | 31.266 | 2.68e-43 | 155.0 | |
| Eupl7g00920 | . | 52 | 350 | AT gene family | AT5G48930 | 26.645 | 4.17e-27 | 110.0 | |
| Eupl5g00358 | . | 4 | 122 | AT gene family | AT2G19070 | 27.642 | 5.03e-09 | 52.4 | |
| Eupl5g02017 | . | 1 | 428 | AT gene family | AT5G48930 | 26.164 | 2.91e-37 | 139.0 | |
| Eupl5g02048 | . | 5 | 435 | AT gene family | AT2G19070 | 23.838 | 5.72e-26 | 108.0 | |
| Eupl5g02175 | . | 3 | 430 | AT gene family | AT5G48930 | 28.16 | 4.75e-44 | 157.0 | |
| Eupl10g00291 | . | 273 | 447 | AT gene family | AT2G19070 | 27.841 | 5.18e-13 | 64.7 | |
| Eupl10g00290 | . | 62 | 273 | AT gene family | AT2G19070 | 27.311 | 2.01e-18 | 81.6 | |
| Eupl7g00196 | . | 1 | 430 | AT gene family | AT5G48930 | 29.451 | 2.03e-54 | 186.0 | |
| Eupl7g00197 | . | 1 | 427 | AT gene family | AT5G48930 | 29.556 | 4.15e-49 | 171.0 | |
| Eupl7g00320 | . | 1 | 432 | AT gene family | AT5G48930 | 28.508 | 2.28e-60 | 201.0 | |
| Eupl7g01714 | . | 10 | 402 | AT gene family | AT5G48930 | 29.529 | 6.27e-34 | 129.0 | |
| Eupl10g00510 | . | 182 | 274 | AT gene family | AT2G19070 | 39.362 | 3.42e-14 | 66.6 | |
| Eupl10g00511 | . | 182 | 292 | AT gene family | AT2G19070 | 34.821 | 2.93e-13 | 62.4 | |
| Eupl3g02518 | . | 267 | 451 | AT gene family | AT2G19070 | 51.872 | 3.35e-64 | 202.0 | |
| Eupl3g02517 | . | 9 | 250 | AT gene family | AT2G19070 | 50.206 | 4.69e-84 | 257.0 | |
| Eupl3g01968 | . | 10 | 430 | AT gene family | AT5G48930 | 28.176 | 1.56e-48 | 170.0 | |
| Eupl7g01162 | . | 25 | 401 | AT gene family | AT2G19070 | 26.154 | 4.19e-25 | 105.0 | |
| Eupl7g01163 | . | 25 | 401 | AT gene family | AT2G19070 | 26.923 | 6.15e-26 | 107.0 | |
| Eupl7g01328 | . | 70 | 433 | AT gene family | AT5G48930 | 34.211 | 9.12e-64 | 207.0 | |
| Eupl2g00810 | . | 52 | 410 | AT gene family | AT5G48930 | 34.127 | 5.26e-41 | 149.0 | |
| Eupl11g01757 | . | 11 | 445 | AT gene family | AT2G19070 | 26.991 | 8.67e-29 | 115.0 | |
| Eupl14g00939 | . | 10 | 460 | AT gene family | AT1G03495 | 35.805 | 1.03e-89 | 279.0 | |
| Eupl14g00937 | . | 10 | 454 | AT gene family | AT1G03495 | 35.837 | 1.37e-83 | 263.0 | |
| Eupl14g00934 | . | 10 | 461 | AT gene family | AT1G03495 | 37.263 | 1.67e-93 | 289.0 | |
| Eupl14g00933 | . | 185 | 293 | AT gene family | AT1G03495 | 28.358 | 1.93e-10 | 55.5 | |
| Eupl14g01223 | . | 23 | 401 | AT gene family | AT2G19070 | 26.357 | 7.32e-24 | 101.0 | |
| Eupl14g01224 | . | 23 | 401 | AT gene family | AT2G19070 | 27.154 | 4.32e-25 | 105.0 |