AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00035 ATGTCTGCTTCGATGGTCGCTATCACCGCAAATCCAGCGGTCAACAACAGCTCTTCCTTGGCTTTGGGTACGAGGAGGAGAAGTGTTGCTGTCACCGAGAAGAAATCATCCAACATTGAGATAATCTCCGATGGCGGTGGTGGAGTTTCTGAACCGGTGGGTGGTGATGGAAAGGATCACAGCCATTCGGTTAGGGGGGAGATGGTTCTTGAGAAACCTAGAGATTTATCGGCGTTGCAAGCAAAGAAAGGTCTTACCAATTCCACCGTCTCGCCTCGGCGCAGGAAGGTCGGTTCAAGATCACAGGAGAAACCCTTGTGGTTAACCGTAATTAGTATTTTCGCGAAGAATTTCTTGCTTCTTCTTGTACTCCTAGGGCTGGTTCAGATGATTCGTAAATTGGCTCTCAATTCTGGGTCTGGGGATGGTTCTGTTTCTTCCATGGGCATTGCGAATTTCGAAGGTCGGATTGCAGAAGTCGAAGCGTTCTTAAAGACAACGACAAAGATGATGCAGGTTCAGGTGGAGGTCGTGGATAGGAAGATTGAGAGTGAGGTCGGAGGTTTGAAGAGGGAATTGACGAAAAGGGTTGAAGAGAAAAGCTTGCTGTTTGAGAACAAGCTGAATAAATTAGAAGCCAAGACTGACGATTTGGAGGGTTCTTTGGGTGAGTTGAAGTCTAGTTACTTTACAAAAGAAGATTTCGAGAGATTTTTGGATGAATTGAAGGACAGTAGAAGTCTCGAGGGAAGCAATAAAGATTGGAGCTTGGATGAGATTAGGGCTTTTGCAAGGGAGATTGTTGAAAAGGAGATTGAAAGGCATGCCGCGGACGGGCTAGGTATGGTTGATTATGCACTGGCTTCTGGTGGGGCTATGGTAGTTGGGCATTCAGAACCATACATGTCTGGGAAGGGTAGCAGTTGGTTTCCTTTTCCTAAGAGTCGCAATGGGGTCCATATTGATGCACAAAAGATGTTGCAGCCGAGTTTTGGAGAGCCTGGTAAGTGTTTTGCTCTCAATGGAAGCACTGGGTTTGTGGAGATTAGGCTCAGGACAGCAATCATTCCGGAGGCCGTTACCTTGGAACATGTTGCGAAGAGCGTAGCCTATGACAGGTCAAGTGCTCCAAAGGACTGTCGGATCTCTGCATGGTTTCAAGGGCGCGATTCATCTAGGCGGGACGAGAAGATGTTTCTGTTGACTGAGTTTGCTTATGATCTCGAGAGAAGCAATGCTCAGACTTTTAATGTGGAATCGGCAGATTCAGGCAGCATAAACATAGTCAGGCTCGACTTCACTTCCAACCATGGAAGCCGTCACACGTGCATTTATCGCCTGAGGGTGCATGGGCATGAACCGGAATCCATTGCTGCGTTGACAATGCAGTCTTGA 1395 47.46 MSASMVAITANPAVNNSSSLALGTRRRSVAVTEKKSSNIEIISDGGGGVSEPVGGDGKDHSHSVRGEMVLEKPRDLSALQAKKGLTNSTVSPRRRKVGSRSQEKPLWLTVISIFAKNFLLLLVLLGLVQMIRKLALNSGSGDGSVSSMGIANFEGRIAEVEAFLKTTTKMMQVQVEVVDRKIESEVGGLKRELTKRVEEKSLLFENKLNKLEAKTDDLEGSLGELKSSYFTKEDFERFLDELKDSRSLEGSNKDWSLDEIRAFAREIVEKEIERHAADGLGMVDYALASGGAMVVGHSEPYMSGKGSSWFPFPKSRNGVHIDAQKMLQPSFGEPGKCFALNGSTGFVEIRLRTAIIPEAVTLEHVAKSVAYDRSSAPKDCRISAWFQGRDSSRRDEKMFLLTEFAYDLERSNAQTFNVESADSGSINIVRLDFTSNHGSRHTCIYRLRVHGHEPESIAALTMQS 464
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00035 464 Gene3D - 261 453 - -
Eupl1g00035 464 PANTHER SAD1-UNC-84-LIKE PROTEIN-RELATED 83 452 IPR045119 GO:0005635(PANTHER)|GO:0043495(PANTHER)
Eupl1g00035 464 MobiDBLite consensus disorder prediction 41 62 - -
Eupl1g00035 464 Coils Coil 194 228 - -
Eupl1g00035 464 ProSiteProfiles SUN domain profile. 290 454 IPR012919 -
Eupl1g00035 464 Pfam Sad1 - UNC-like C-terminal 322 452 IPR012919 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00035 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2214720 Eupl Eupl1g00035 Eupl-Chr1:1204278 Eupl5g00065 Eupl-Chr5:1351057