AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00037 ATGATGGGCATATTCGAAGAAATGGGTTTTAATGGGAATCTCGATTGTCTGTCGGTTCCACCTGTGGAAGGAGATATGGCACCGGAAACTGAACCTGAGGCAACTGTGGAGGAGGATTACAGTGATGAGGAGATGGATGTGGATGAGCTCGAGAGGAGGATGTGGCGGGACAGGATGCTCTTGAGGCGGCTCAAAGAACAGAATAAGGGGAAGGATGGAATTGACACTGCAAAGCAGCAACAGTCTCAGGAGCAGGCTCGAAGGAAAAAGATGTCACGGGCACAAGATGGGATCCTAAAATACATGTTGAAGATGATGGAGGTTTGTAAAGCTCAGGGATTCGTCTATGGGATAATCCCTGAGAAGGGGAAACCGGTGAGTGGGGCATCCGACAACCTACGTGCATGGTGGAAGGAGAAGGTCAGATTTGATCGCAATGGCCCCGCTGCTATTGCCAAGTATCAGGCAGATCATGCCATCCCCGGGACGAATGAACACTGTAATGTGGTGGCTTCCACCCCCCACACCTTGCAAGAACTTCAAGACACCACACTCGGTTCGCTTCTGTCAGCTCTGATGCAGCACTGTGATCCACCCCAGAGACGGTTCCCGTTGGAGAAGGGTGTTGCCCCTCCATGGTGGCCCACCGGCAATGAGGAATGGTGGCCCCAATTGGGCTTGCCAAAAGATCAAGGTCCTCCGCCATACAAAAAACCTCATGATCTGAAGAAGGCATGGAAGTTCAGCGTCCTCACGGCCGTGATCAAGCATATGTCGCCTGATATTGCCAAGATCCGCAAGCTTGTGAGGCAGTCCAAGTGCTTGCAGGATAAAATGACGGCCAAGGAGAGCGCGACTTGGTTGGCCATCATTAACCAAGAGGAGGCCTTGTCTCGACAGCTCCACCCTGAGAGTTGCCCCCCAATGCTTTCAGCCAGTGGGAGTGGACCTTTCTCCATCAGCGACAGCAACGAGTATGATGTTGAAGGGGTAGAAGATGATCTGACCATCGAAGTACAAGATTACAAGCTCCGGGATGTCAATCTGTTCAATTTGGGGATGGGGGGAACAAAGGAGAGTTTTCTGGTTCAGCAACCATCTCCTCCGATCAAGGAAGAGATAGATAACTCAGATTTCATCAGGAAGAGGAAGCCATCTGCTGAGCTGGACACGATGATAGAGCACAAAATCTATACCTGTGAGTACCCTCAATGCCCATACGGCGATTACCGCCTTGGATTTCTGGACAGAAATTCTAGGAACAATCACCAGTCAAGTTGTCCGTATCGAAGTATTTCACCAGGGTTCGGATTATCAGCAACCTTCCAGATTAATGAAGACAAACCACCAGTCTTCTCTTTGCCCTATGCACAACTGAAGCCAGTGGCGCTACCGCCACCACCAAATCCATGTTCACAATCCTTCAATCTATCTCGGCTTGGCCTTCCAGAAGATGGACAAAAAATGATTAGTCAGCTCATGTCATCATATGATACTAATCTTCAGCAGAGCAAGAGTTCGAATCCTGGAAACATTACGGTTATAGAAGATCAACATCCTCTGCCACAGAAAATTCAGCACAATGAGAACTACTATGGCCAAGGGGTTGTAATGGGGGGTAACATCTTCGAAGAAACTGACATGCCCATTAATCAAACATCAACGTTTCCAAGAGAGGAAAGTCAATTTGATCCGTGTAAGGTGTTTGATCCACGGTTTGAGACCAATCCCAGCAACATTGCTGCCGACTTCAGATTTGGTTTCAACTTGGCCTCTGTTGATTATACAGAGGTGTTAAATAGAGGAATGGTGGAAACGTTCTCGAAGCAGGACAGTTCAATCTGGTACCTGTAA 1854 48.6 MMGIFEEMGFNGNLDCLSVPPVEGDMAPETEPEATVEEDYSDEEMDVDELERRMWRDRMLLRRLKEQNKGKDGIDTAKQQQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADHAIPGTNEHCNVVASTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPTGNEEWWPQLGLPKDQGPPPYKKPHDLKKAWKFSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALSRQLHPESCPPMLSASGSGPFSISDSNEYDVEGVEDDLTIEVQDYKLRDVNLFNLGMGGTKESFLVQQPSPPIKEEIDNSDFIRKRKPSAELDTMIEHKIYTCEYPQCPYGDYRLGFLDRNSRNNHQSSCPYRSISPGFGLSATFQINEDKPPVFSLPYAQLKPVALPPPPNPCSQSFNLSRLGLPEDGQKMISQLMSSYDTNLQQSKSSNPGNITVIEDQHPLPQKIQHNENYYGQGVVMGGNIFEETDMPINQTSTFPREESQFDPCKVFDPRFETNPSNIAADFRFGFNLASVDYTEVLNRGMVETFSKQDSSIWYL 617
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00037 617 SUPERFAMILY DNA-binding domain of EIN3-like 174 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Eupl1g00037 617 Coils Coil 33 67 - -
Eupl1g00037 617 Gene3D - 172 305 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Eupl1g00037 617 Pfam Ethylene insensitive 3, DNA-binding domain 48 295 IPR047091 GO:0003700(InterPro)
Eupl1g00037 617 MobiDBLite consensus disorder prediction 24 48 - -
Eupl1g00037 617 FunFam Ethylene insensitive 3-like 1 80 158 - -
Eupl1g00037 617 FunFam Ethylene insensitive 3-like 1 168 305 - -
Eupl1g00037 617 Gene3D - 80 161 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Eupl1g00037 617 MobiDBLite consensus disorder prediction 66 91 - -
Eupl1g00037 617 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 560 IPR006957 GO:0003677(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(InterPro)
Eupl1g00037 617 MobiDBLite consensus disorder prediction 30 46 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00037 K14514 ethylene-insensitive protein 3
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197794 Eupl Eupl1g00037 Eupl-Chr1:1243462 Eupl1g00350 Eupl-Chr1:15072733
2214722 Eupl Eupl1g00037 Eupl-Chr1:1243462 Eupl5g00072 Eupl-Chr5:1521125
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Eupl1g00037 . 2 531 EIL Transcription Factor family AT3G20770 61.051 0.0 651.0
Eupl5g00072 . 2 628 EIL Transcription Factor family AT3G20770 56.26 0.0 659.0
Eupl3g01439 . 33 308 EIL Transcription Factor family AT5G65100 59.42 1.07e-111 332.0
Eupl1g00350 . 19 562 EIL Transcription Factor family AT1G73730 56.261 0.0 554.0
Eupl5g00412 . 9 564 EIL Transcription Factor family AT1G73730 52.316 1.83e-178 514.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Eupl EIN3_DNA-bd 7.7e-133 No_clan TF EIL