Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl1g00040	ATGGACAACTATGAAGCTACAAGGATTGTGTTCTCAAGGATCCAGAACATAGATCCTGAGAATGCTTCTAAGATCATGGGACTCCTCCTCATACAAGATCATGGTGAGAAGGAGATGATTCGTCTTGCTTTTGGTCCTGAGGCCCTCCTCCATTCTGTTGTCCTTAAGGCTCGTAAGGACCTCTCTCTTTCCTCCACTACTACCCCTTCTTCTCCTTTCTTCTCCAACCCCATCTCCATCTCTCGACAAAATATGCTTATTCCATCTCCAACTTGTTCCTCTTCATGGGCTCCTAACACTTTCTCTGATCTACACAACCCAGATGATCTTATCAGTCCCAATTCAACCACCTCCGCCTCTTACGCAGCAGTAGTAGGTATCAATGGCTTCAACACCAGCACCACGACCACAACCACCGCCACCACCACCACCACCAACAACAACAACATGTTTGTTGGCTGTTCCTCTTCTTCGCCCACTTCTTCACCTTCTCCTTACTACGATCTCATCGATGATTTCCAGCTGCAAGATCAGTTGTCTTTCCTTAACGATGGGGTCTCCCCAACTATCGGTCCAAAGACCGCTGACTTGTTTTATCCACCACCGGAGTCAGCTACCAGTCCCTGCCCTAGCCCCAGCAGCAACACTGAAGGCATGCTTTTCCCTCCTTACACCCCCAATTGGGGAGTGAACAACGGGTTCCACCACCGGCGGAGCAGCTCCGTCACTGATATTTGTCTAGGATCCGATCCTTTGGGGTCCGGATTCGGGTGGAAACCATGCCTATACTTCGCCAGAGGCTACTGCAAGAACGGAACCAGCTGCAGGTTCCTCCATGGTCTCCCCGATTCCTCCGATGCCACCACTATTGTGGGCTCCCCTTCCAAGCTTGATGTCATGGAACAGTGCCATGAGCTACTCAGGTCCAAAACCCAGCAGCAGCAACAGCAGCAGCAGCAGCAGAGATTGAGCGCCGCTTCCCAGCTCATGGCCTCCGCCTCTTTTCCATACTCAGCTGCTGCTACCGGCAAATGCATGAATTTCCTTCTTCAACAACAACAACAACAACAACAGAATGATACCCAGAGGGCAACAGCTGCGGCCTTGATGTTAGGCGAAGACATTCACAAATTCGGCCGGACACGAATGGAGAGAAGTGACTTTCTGAATCCCGGGGGAGGGATGGTGAACCCAGGATCCAGGCAGATCTACCTAACGTTCCCGGCTGATAGTACCTTCCGAGAAGAAGATGTCTCCAATTACTTCAGCATTTACGGACCGGTACAGGATGTGAGGATCCCATATCAGCAGAAACGGATGTTTGGGTTCGTTACTTTCGTTTACCCAGAGACCGTGAAGCTCATCCTCGCCAAGGGTAACCCTCATTTCGTCTGCGACGCTCGCGTGCTCGTCAAGCCCTACAAGGAGAAGGGGAAAGTCCCTGACAAGAAACAGCAGCAACAGCAGGTGGAGAGAGGAGAGTTCTCAGCATGTACTACTCCTACTGGCCTCGATTCTAGAGATCCCTACGATCTGCAGCTGGGAGGAGCGAGGATGTTCAACACCACCACCACCACTCAGGACATGCTGTTGAGAAGAAAATTAGAGGAACATGCCGACTTGCAGCAAGCCATAGATCTTCAAAGTCGGAGATTGATGAGTCTGCAGCTTCTCGATTTGAAGAAACACCACCGCAATCTAAATTTATCCGCTGGGGCTGCTGCTTCCATTCCCTCCCCAACTCATGTTCACTCCCCCCACTTCAATCACACACTCATTCTTCCTTCTTCCTCATCGGATCGTAGTAGTAGTCCTGAAGGCCCACAAGAGAATTGTGCGAGCCCTGCTACAGCTGCTGCTGATCAGCATTTGCAGCAGCACGTCGCTGCCGGCAAAGAAGAATTCAACCGTGATGACAATGGCAATGGCAAGGTGGAGAATCCCAACCATGATGACTACTGCGACTTCCATGATAGCAATGTGGATCACATTCTCCCGGATAGTCCCTTTGCTTCACCTACCAAATATGGTGGAGACCCGCCTTCCTTCTTCTCCAACACTGTGACAGATGCTGAGAGAAACGCCACAATTGCAGTCTCATCATCATCATCTTCTTCTTCTTCTTCTTCATGTTCTTCGAACAATAATAATAATAACCACCTAATCGCATCGTCGATACTACCAGCCACGTCTACTCTGGACATGGCTTCTTTGAAATCATGTTTCTTCCAAATTCCCAGGTACCATTACTCAATCCAGCACTTGCCCTCTATTTCTTTGCTCTAA	2286	49.91	MDNYEATRIVFSRIQNIDPENASKIMGLLLIQDHGEKEMIRLAFGPEALLHSVVLKARKDLSLSSTTTPSSPFFSNPISISRQNMLIPSPTCSSSWAPNTFSDLHNPDDLISPNSTTSASYAAVVGINGFNTSTTTTTTATTTTTNNNNMFVGCSSSSPTSSPSPYYDLIDDFQLQDQLSFLNDGVSPTIGPKTADLFYPPPESATSPCPSPSSNTEGMLFPPYTPNWGVNNGFHHRRSSSVTDICLGSDPLGSGFGWKPCLYFARGYCKNGTSCRFLHGLPDSSDATTIVGSPSKLDVMEQCHELLRSKTQQQQQQQQQQRLSAASQLMASASFPYSAAATGKCMNFLLQQQQQQQQNDTQRATAAALMLGEDIHKFGRTRMERSDFLNPGGGMVNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDKKQQQQQVERGEFSACTTPTGLDSRDPYDLQLGGARMFNTTTTTQDMLLRRKLEEHADLQQAIDLQSRRLMSLQLLDLKKHHRNLNLSAGAAASIPSPTHVHSPHFNHTLILPSSSSDRSSSPEGPQENCASPATAAADQHLQQHVAAGKEEFNRDDNGNGKVENPNHDDYCDFHDSNVDHILPDSPFASPTKYGGDPPSFFSNTVTDAERNATIAVSSSSSSSSSSSCSSNNNNNNHLIASSILPATSTLDMASLKSCFFQIPRYHYSIQHLPSISLL	761

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl1g00040	761	ProSiteProfiles	Zinc finger C3H1-type profile.	255	282	IPR000571	GO:0046872(InterPro)
	Eupl1g00040	761	SUPERFAMILY	CCCH zinc finger	258	283	IPR036855	GO:0046872(InterPro)
	Eupl1g00040	761	MobiDBLite	consensus disorder prediction	478	502	-	-
	Eupl1g00040	761	SUPERFAMILY	RNA-binding domain, RBD	412	488	IPR035979	GO:0003676(InterPro)
	Eupl1g00040	761	Gene3D	-	406	498	IPR012677	-
	Eupl1g00040	761	Pfam	RNA recognition motif	413	457	IPR000504	GO:0003723(InterPro)
	Eupl1g00040	761	CDD	RRM-AtC3H46-like	403	472	IPR034365	-
	Eupl1g00040	761	MobiDBLite	consensus disorder prediction	627	658	-	-
	Eupl1g00040	761	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	401	477	IPR000504	GO:0003723(InterPro)
	Eupl1g00040	761	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	676	-	-
	Eupl1g00040	761	SMART	c3hfinal6	257	281	IPR000571	GO:0046872(InterPro)
	Eupl1g00040	761	MobiDBLite	consensus disorder prediction	578	658	-	-
	Eupl1g00040	761	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	408	479	-	-
	Eupl1g00040	761	MobiDBLite	consensus disorder prediction	582	621	-	-
	Eupl1g00040	761	SMART	rrm1-1	402	472	IPR000504	GO:0003723(InterPro)
	Eupl1g00040	761	Gene3D	-	254	347	-	-
	Eupl1g00040	761	Pfam	Torus domain	260	287	IPR032297	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl1g00040	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	2197797	Eupl	Eupl1g00040	Eupl-Chr1:1356089	Eupl6g00267	Eupl-Chr6:4171014
	2214724	Eupl	Eupl1g00040	Eupl-Chr1:1356089	Eupl5g00075	Eupl-Chr5:1583201