AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00044 | ATGGAAATGGAAATGGAAATGGAAGGAGGTTTGGAAGGAAAGTTGGAGGAGTTGAGAGAGACTTTTAAAAGTGGGAAGACAAAGAGTATTACTTGGAGGAAGTCTCAGCTTAAGGGGTTGCTTACTCTCCTCAATGAGAAGGAAGGAGAGATCTTCAAGGCTCTTAATCGAGACTTGGGCAAACACCATGTTGAAGCTTTTAGAGATGAGGTAGGAATTGTAATAAAATCTGTAAATCTTGCATTGGGGAGTTTAAAACAATGGACGGCAAGCAAAAAGGTATGTGTTCCGCGGGTTGCATTCCCTACAACAGCAGAAGTGGTGCCAGAACCTCTTGGTCTTGTTCTCATATTCTCCTCTTGGAATATGCCCATCGGCCTAGCCTTGGAACCATTGATAGGAGCAATAGCTGCAGGAAATACAGTAGTTCTCAAACCCTCAGAATTGGCTCCTACATGTTCTTCTATTCTAGCGAGTATCATTCCCATGTACTTGGACAATAAAGCTGTGAAGGTCGTTGAAGGCGGAACGACTATCGGGGAACGATTGTTGGAGAAGAAATGGGACAAGATCTTCTTCACAGGGAGTCCGCGAGTTGGAAGTATTGTCATGTCCGCAGCTGCAAAGCATCTAACTCCAGTTACTCTAGAGTTGGGTGGAAAATGCCCCGCTGTCGTAGATTCCCTCTCGAACTCTTGGGATAGAAAGGTCGCTGCAAAGCGGCTAGTTACAGGGAAATATGGGACCTGCAACGGCCAGGCTTGCATAGGAGTCGACTATATACTTGTCGATGAGAAATTTGGACTTACTTTGGTTGAATTAATGAAGGATGTGATCAAGAGATTGTTTGGGGAGAACCCAAAAGAAACAAACAGCATCGCAAGGATTATCAACAAACAACATTTTCGGAGATTGAAGAATCTTTTAGATGAACCTGAAGTCAAAGCTTCTATCATCCATGGTGGTTCAATGGATGAGGAAAACTTGTTCATCGAGCCAACGATTTTGTTGAATCCCCCACTCGAAGCTGAGATCATGACTGAAGAAATCTTCGGTCCACTGCTTCCAATAATTACATTGAAGAAGATTGAAGACAGCATTGAGTTCATAAACTCAAGGCCTAAGGCTCTTGCCCTATATGTGTTCACCGGTAGTGAGAAATTGAAGAAAAGGGTGATATCCGAAACATCTTCAGGAAGTGTGACATTTAACGACACAATTATTCAATATGCATGTGATACGCTTCCCTTCGGAGGTGTTGGGCAGAGTGGTTTTGGGAAGTACCACGGGAAGTTCTCATTCGACACATTCAGCAACGAGAAGGCAGTGCTCAGAAGCAGCTTCATTTCTGAATTTTGGTTCAGGTATCCACCCTGGACCAATTACAAGTTGCAGCTCCTTCGATCAGCTTATAGTTTTGATTATCTTGGCCTAGTACTTACCGTATTGGGCTTGAAGAAATATTAG | 1467 | 43.42 | MEMEMEMEGGLEGKLEELRETFKSGKTKSITWRKSQLKGLLTLLNEKEGEIFKALNRDLGKHHVEAFRDEVGIVIKSVNLALGSLKQWTASKKVCVPRVAFPTTAEVVPEPLGLVLIFSSWNMPIGLALEPLIGAIAAGNTVVLKPSELAPTCSSILASIIPMYLDNKAVKVVEGGTTIGERLLEKKWDKIFFTGSPRVGSIVMSAAAKHLTPVTLELGGKCPAVVDSLSNSWDRKVAAKRLVTGKYGTCNGQACIGVDYILVDEKFGLTLVELMKDVIKRLFGENPKETNSIARIINKQHFRRLKNLLDEPEVKASIIHGGSMDEENLFIEPTILLNPPLEAEIMTEEIFGPLLPIITLKKIEDSIEFINSRPKALALYVFTGSEKLKKRVISETSSGSVTFNDTIIQYACDTLPFGGVGQSGFGKYHGKFSFDTFSNEKAVLRSSFISEFWFRYPPWTNYKLQLLRSAYSFDYLGLVLTVLGLKKY | 488 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00044 | 488 | FunFam | Aldehyde dehydrogenase | 220 | 423 | - | - | |
| Eupl1g00044 | 488 | PANTHER | ALDEHYDE DEHYDROGENASE | 11 | 485 | IPR012394 | GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro) | |
| Eupl1g00044 | 488 | FunFam | Aldehyde dehydrogenase | 19 | 223 | - | - | |
| Eupl1g00044 | 488 | SUPERFAMILY | ALDH-like | 15 | 460 | IPR016161 | GO:0016491(InterPro) | |
| Eupl1g00044 | 488 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 19 | 441 | IPR016162 | GO:0016491(InterPro) | |
| Eupl1g00044 | 488 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 220 | 423 | IPR016163 | GO:0016620(InterPro) | |
| Eupl1g00044 | 488 | PIRSF | ALDH | 1 | 482 | IPR012394 | GO:0006081(InterPro) | |
| Eupl1g00044 | 488 | Pfam | Aldehyde dehydrogenase family | 19 | 443 | IPR015590 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00044 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2197799 | Eupl | Eupl1g00044 | Eupl-Chr1:1426440 | Eupl3g02036 | Eupl-Chr3:49540138 |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Eupl11g00697 | . | 1 | 556 | Aldehyde Dehydrogenase gene family | AT5G62530 | 77.558 | 0.0 | 928.0 | |
| Eupl11g00601 | . | 1 | 501 | Aldehyde Dehydrogenase gene family | AT1G74920 | 81.836 | 0.0 | 874.0 | |
| Eupl11g00544 | . | 1 | 538 | Aldehyde Dehydrogenase gene family | AT3G48000 | 78.625 | 0.0 | 889.0 | |
| Eupl1g00044 | . | 4 | 484 | Aldehyde Dehydrogenase gene family | AT4G36250 | 55.509 | 0.0 | 591.0 | |
| Eupl1g00176 | . | 228 | 277 | Aldehyde Dehydrogenase gene family | AT3G48000 | 52.0 | 4.61e-10 | 53.5 | |
| Eupl9g00019 | . | 5 | 501 | Aldehyde Dehydrogenase gene family | AT3G24503 | 73.146 | 0.0 | 773.0 | |
| Eupl4g00836 | . | 1 | 501 | Aldehyde Dehydrogenase gene family | AT1G74920 | 81.637 | 0.0 | 879.0 | |
| Eupl4g00835 | . | 247 | 501 | Aldehyde Dehydrogenase gene family | AT1G74920 | 77.255 | 1.88e-154 | 437.0 | |
| Eupl4g00834 | . | 1 | 234 | Aldehyde Dehydrogenase gene family | AT1G74920 | 76.496 | 5.19e-132 | 379.0 | |
| Eupl4g00750 | . | 1 | 538 | Aldehyde Dehydrogenase gene family | AT3G48000 | 78.004 | 0.0 | 886.0 | |
| Eupl9g01269 | . | 1 | 496 | Aldehyde Dehydrogenase gene family | AT2G24270 | 88.911 | 0.0 | 935.0 | |
| Eupl13g00480 | . | 75 | 606 | Aldehyde Dehydrogenase gene family | AT2G14170 | 78.399 | 0.0 | 869.0 | |
| Eupl3g01605 | . | 171 | 606 | Aldehyde Dehydrogenase gene family | AT2G14170 | 75.515 | 0.0 | 685.0 | |
| Eupl3g01604 | . | 86 | 144 | Aldehyde Dehydrogenase gene family | AT2G14170 | 55.0 | 3.54e-12 | 57.4 | |
| Eupl10g00273 | . | 1 | 496 | Aldehyde Dehydrogenase gene family | AT2G24270 | 88.105 | 0.0 | 925.0 | |
| Eupl3g02036 | . | 12 | 484 | Aldehyde Dehydrogenase gene family | AT4G36250 | 64.059 | 0.0 | 650.0 | |
| Eupl6g01602 | . | 8 | 526 | Aldehyde Dehydrogenase gene family | AT1G79440 | 80.385 | 0.0 | 848.0 | |
| Eupl3g00454 | . | 62 | 147 | Aldehyde Dehydrogenase gene family | AT4G34240 | 53.488 | 2.07e-23 | 93.2 | |
| Eupl3g00455 | . | 90 | 482 | Aldehyde Dehydrogenase gene family | AT1G44170 | 71.756 | 0.0 | 600.0 | |
| Eupl3g00456 | . | 1 | 482 | Aldehyde Dehydrogenase gene family | AT1G44170 | 68.88 | 0.0 | 702.0 | |
| Eupl12g01224 | . | 1 | 545 | Aldehyde Dehydrogenase gene family | AT3G66658 | 81.835 | 0.0 | 945.0 |