AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00046 ATGGAAGAATTATCTTCTAGTGGGCATCGGTTTAGAAGAATACCACGTCAATCCTTCGCTGGGAATCTGGAGTTGGACCCATCGCTAAATGAAAATTTGGAGCAGTGGCCCCATCTGAATGAACTGGTTCAATGCTACAAAGCTGATTGGGTAAAGGATGAAAGCAAGTATGGACACTATGAAAGCATTGCTCCTATCTCATTTCAAAATCAGATTTTTGAAGGGCCTGACACTGATATTGAAACAGAAATGCGTCTTGCTAGTGCAAGGCATTCCAGGACTGAAGATGCTACTGATGATGACATTCCCAGTACCTCAGGAAGGCAATCATCAGAGGCTAGCTCATCTGACATGGCATACTCAAAAGTTTTGAAGCACTTTGGTGAATCACCATTGCCTGCTTATGAGCCAGCTTTTGACTGGGAAAATGAGAGATCAATTATCTTTGGGCAAAGAACTCCAGAAACTCATCCGGCACAGTGTGGCAGTGGATTGAAGATCTCTGTTAAGGTTTTGTCCTTATTGTTTCAAGCAGGACTAGTTGAGCCGTTTTATGGTACCATTTGTTTATATAATAGGGAGAGAAGAGAGAAATTGTCAGAGGATTTCTATTTTCACGTGCTACCAACTGAAATGCAGGATGCTAGACTTTCTTCTGAGCCTCGCGGTATTTTCTCTTTAGATGCTCCGTCAGCATCAGTTTGCCTGCTAATTCAGCTAGAGAAACCTGCCACAGAAGAAGGCGGGGTTACCCCTTCTGTCTATTCACGCAAGGAACCAGTCCACTTGACTGAGAGAGAAAGGCAGAAACTTCAAGTGTGGTCTCGAATCATGCCTTACAGAGAGTCCTTTGCTTGGGCTATGGTTCCCCTATTTGATAACAACAGCACTGTAGCTTCCGGTGGGGCTGGCTCCCCCAGCAGTCCTCTTGCTCCTAGCATATCTGGGTCAAGTTCTCAAGAGAGCGTTGCTGAACCTGTTACAAAAATCACTTTAGATGGGAAGCAGGCCCAGTATTCAAATGGAAGTCCTGTCATCATTGAGATATCTTACCTAAATAAAGTTAAAGAAAGCTATACCGAGGACTCACTTCAGGATCCTAAGCGGAAGGTTCATAAACCAGTGAAAGGTGTTTTGAGATTGGAAATTGAAAAGGTCCAGGCCAGCCATGTTGACCTCGACAATATTTCAGAAAGTGGCAGTGTGACCAATGATTCCATTGATGCGGGGGATCGATATGCTGACTCCGCATTTACAAAATGCCTGAGTAACGGTTCTGACGGACCTCGGAATGGCAATTCCAAGTGGAACTTCCTTGATGGAAAACAAGTGCGCCGAAATGGTTCAACTGTTGTTCCTGGAAATAATCAAGATTTCAGTGCTGATGATTTCCAAGCTTTTGACTTCCGCATTATGACAAGAAGCGAGCCTTTTTCACAGCTTCTTCATTGTCTTTATCTATATCCCTTGACTGTCAGTTTGAGCCGGAAAAGGAATTTGTTCATACGCATAGAACTGAGAAAGGATGATGCGGATATTCGTAAACAGCCGTTGGAGGCAATTTATCCAAGGGACCAAGGTGTGCCACTTCAGAAATGGGCTCACACACAAGTCGCACTCGGTGCTAGGGCAGCCTGCTACCATGATGAGATTAAACTTTGCCTGCCTGCTATTTTGACACCCCAGCAACATCTTCTATTCACTTTCTTTCATGTTGACCTTCAAACAAAACTTGAAGCTCCAAAACCAGTGGTAATCGGATATGCTGCACTCCCATTGTCTACATATGCTCAGTTGCGATCTGAAATTTCCTTGCCGATTATGAGAGAGCTGGTTCCACATTATCTCCAAGATAGTGGCAAGGAGAGGTTGGATTACTTGGAAGATGGGAAAAATGTCTTTAGATTGCGGTTAAGACTAAGCTCCTCTCTATACCCAACTAATGAGCGTATCAGAGATTTTTTTCTTGAATACGATAGGCATACACTTCGCACAAGCCCTCCTTGGGGTTCTGAACTTCTTGAGGCCATCAACAGTTTAAAGAATGTAGATTCCACCGTCTTGCTGCAGTTTCTGCAGCCAATCCTGAATATGCTTCTTCATCTAATTGGTGATGGTGGTGAAACCCTCCAGGTTGCAGCCTTTCGAGCCATGGTCAATATCTTAACCCGAGTGCAACAGGAATCATCAGATGGTGCTGAAAGAAACCGGTTTCTTGTTAACTACGTGGATTACGCTTTTGATGACTTTGGGGGTCGACAACCACCGGTTTATCCTGGCTTGTCCACGGTGTGGGGAAGCTTGGCTCGCAGTAAGGCTAAAGGCTACCGTGTTGGGCCAGTTTATGATGATGTCTTGGCAATGGCTTGGTTTTTCCTGGAGCTAATTGTAAAATCTATGGCACTGGAGCAGACTCGCCTTTTCTACCATAGTCTTCCTTCAGGTGAAGATGTTCCACCATTGCAATTGAAGGAAGGTGTATTCAGATGTATTATGCAGTTGTATGATTGCCTTCTTACAGAGGTGCATGAGCGCTGCAAGAAGGGATTAAGTTTGGCAAAACGTTTGAACAGCAGTTTGGCCTTCTTTTGTTACGATCTTTTGTCCATTATTGAGCCTCGCCAAGTCTTTGAACTGGTGTCATTGTACATGGACAAGTTCTCTGGGGTTTGTCAATCGGTTCTACATGATTGCAAGCTTACATTTTTGCAGATAATATGTGATCATGATCTTTTCGTGGAAATGCCTGGGCGAGATCCTTCAGATAGAAACTATCTTTCATCTGTTTTAATACAGGAACTTTTCCTCACTTGGGATCATGATGATATATCTCAACGGGCTAAAGCAGCTCGAATCTTGGTGGTCCTGATGTGCAAGCATGAATTTGACGCTCGATACCAAAAGCAGGAGGATAAATTATATATTGCTCAGCTATATTTTCCGCTTATTGGACAGATCCTAGATGAAATGCCTGTCTTTTACAACCTGAATGCCATTGAAAAGCGTGAAGTCTTAATTGTCCTTATGCAAATTGTACGCAATCTGGATGATGCATCACTTGTCAGGGCGTGGCAACAAAGCATTGCTCGAACCAGATTATTTTTCAAACTCCTGGAGGAATGCCTTATTCTTTTTGAGCACAAAAAACCAGGTGACAGCATGCTTATGGGCTGCAGTTCTCGCAGCCCAGATGGAGAAGGACCTGTTTCCCCCAAGTATTCTGATAGGCTGTCCCCTGCAATAAACAACTATCTTTCTGAGGCATCTCGGCAAGAAATTAGACCTCAGGCAACGCCAGAGAACGGTTATTTGTGGCAGAGAGTCAGTCCCCAACTAAGCTCCCCTAGCCAGCCATATTCCTTAAGAGAAGCTCTTGCTCAGGCGCAATCTTCTAGGATTGGAGCTTCAACCCGTGCGCTAAGAGAATCTTTGCACCCAATATTGAGGCAAAAACTGGAACTTTGGGAAGAAAACTTGAGTGCTGCTGTTAGTCTCCAGGTTTTGGAGGTAACTGAGAAATTTTCCACGGCTGCAGCATCCCACAGTATTGCTACCGATTACGGAAAATTAGATTGTATTACGTCCATATTTATGGGCTTCTTCTCGCGTAGTCAGCCTCTGGCTTTTTGGAAAGCTTTGGTTCCCGTGTTCAACAGTGTCTTTAATCTTCATGGAGCAACACTAATGGCAAGGGAGAATGACCGCTTCTTAAAGCAAGTTGCATTCCATCTTCTTCGTCTTGCAGTTTTTCGCAATGATAATATCAGGAGAAGGGCAGTAGTTGGGCTCCAGATACTTGTTAGGAGTTCTTTTTATTATTTTATGCACACAACAAGGTTGAGGGTCATGCTGACAATTACCTTGTCAGAGTTGATGTCTGATGTTCAAGTGACTCAGATGAAGTCTGATGGATCACTAGAAGAGAGCGGTGAAGCTCGACGTCTTAGGAAGTCTTTGGAGGAAATGGCAGATGAAAGTAAGAGCCCTGACCTATTAAGAGAGTGCGGGATACCTGAGAGATCTCTTATGGCAGTTGCCGAAGGTTCAGCGGAGAACCGATGGTCCTGGTCAGAGGTAAAATATCTGTCTGACAGTATCCTTCAGGCCCTTGATGCCAGCCTGGAACATGCCCTTTTGGCTTCTCTGATGACGGTGGATAGATACGCAGCTGCCGAGAGCTTCTATAGACTTGCAATGGCATATGCCCCTGTTCCTGATCTTCATATAATGTGGTTACTACATTTATGTGATGCACATCAGGAGATGCAGTCTTGGGCTGAAGCTGCACAGTGTGCAGTTGCTGTCGCTGGTGTCATCATGCAGGCCCTTGTGGGAAGAAACGATGCTGTGTGGAGCAGAGATCACATGGCTGCATTACGCAAAATCTGCCCTATGGTCAGCAATGAGATTACTGGTGAGGCTTCTGCTGCCGAGGTAGAGGGTTATGGTGCATCCAAACTCACAGTCGACTCTGCTGTAAAATACCTACAACTCGCAAATAAGCTTTTTTCTCAAGCTGAGCTCCATCATTTCTGTGCAAGCATTCTAGAGCTCATAATTCCAGTTTATAAAAGCCGGAGGGCATTTGGGCAGCTTGCAAAATGCCACACAACCTTGACGAGCATCTATGAATCGATCCTTGAGCAGGAATCGAGCCCAATACCATTCACTGATGCCACATACTATCGGGTTGGATTCTATGGAGTTCGATTCGGCAAGCTGGATAGAAAGGAATATGTATATCGAGAGCCCCGTGATGTACGCCTGGGTGACATAATGGAGAAGCTTAGTCACATATATGAGTCCAGGATGGACGGCAACCACACGCTGCACATAATTCCAGATTCTAGACAAGTGAATGCAGACGAGTTGCAGCCTGGGGTCTGCTATCTGCAGATAACTGCGGTGGACCCTATCATGGAAGATGAGGATCTAAGCAGCAGAAGAGAGAGGATCTTCTCTCTTTCCACTGGAAGCATGCGTGCTCGTGTCTTCGACCGTTTCTTGTTTGACACCCCATTTACGAAAAATGGCAAGACCCAAGGTGGGTTGGAAGATCAGTGGAAGCGGCGTACTGTACTACAGACAGAGGGTTCATTCCCTGCCCTAGTGAATCGGCTCTTGGTAGTTAAATCTGAATCGCTCGAGTTCTCGCCAGTGGAAAATGCCATCGGGATGATCGAAACTCGGACAGCTGCACTACGTAATGAACTGGAAGAGCCTCGCAGCTCTGAAGGGGATCAACTCCCACGTCTTCAGAGTCTACAGAGGATACTCCAAGGCAGTGTTGCAGTTCAGGTGAACAGTGGAGTCCTGAGTGTTTGCACAGCTTTTCTGTCAGGTGAGCCTGCAACTAGGCTGCGGTCACAGGAACTGCAGCAACTGATTGCTGCACTCCTCGAATTCATGGCAGTCTGCAAGCGCGCGATCAGGGTTCACTTCAGGCTGATTGGTGAGGAAGATCAGGACTTCCACACACAGCTTGTGAATGGGTTCCAATCTCTCACAGCGGAGCTTTCCCATTACATCCCAGCCATTCTCTCCGAGCTTTGA 5553 45.54 MEELSSSGHRFRRIPRQSFAGNLELDPSLNENLEQWPHLNELVQCYKADWVKDESKYGHYESIAPISFQNQIFEGPDTDIETEMRLASARHSRTEDATDDDIPSTSGRQSSEASSSDMAYSKVLKHFGESPLPAYEPAFDWENERSIIFGQRTPETHPAQCGSGLKISVKVLSLLFQAGLVEPFYGTICLYNRERREKLSEDFYFHVLPTEMQDARLSSEPRGIFSLDAPSASVCLLIQLEKPATEEGGVTPSVYSRKEPVHLTERERQKLQVWSRIMPYRESFAWAMVPLFDNNSTVASGGAGSPSSPLAPSISGSSSQESVAEPVTKITLDGKQAQYSNGSPVIIEISYLNKVKESYTEDSLQDPKRKVHKPVKGVLRLEIEKVQASHVDLDNISESGSVTNDSIDAGDRYADSAFTKCLSNGSDGPRNGNSKWNFLDGKQVRRNGSTVVPGNNQDFSADDFQAFDFRIMTRSEPFSQLLHCLYLYPLTVSLSRKRNLFIRIELRKDDADIRKQPLEAIYPRDQGVPLQKWAHTQVALGARAACYHDEIKLCLPAILTPQQHLLFTFFHVDLQTKLEAPKPVVIGYAALPLSTYAQLRSEISLPIMRELVPHYLQDSGKERLDYLEDGKNVFRLRLRLSSSLYPTNERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTVLLQFLQPILNMLLHLIGDGGETLQVAAFRAMVNILTRVQQESSDGAERNRFLVNYVDYAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEQTRLFYHSLPSGEDVPPLQLKEGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYMDKFSGVCQSVLHDCKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQELFLTWDHDDISQRAKAARILVVLMCKHEFDARYQKQEDKLYIAQLYFPLIGQILDEMPVFYNLNAIEKREVLIVLMQIVRNLDDASLVRAWQQSIARTRLFFKLLEECLILFEHKKPGDSMLMGCSSRSPDGEGPVSPKYSDRLSPAINNYLSEASRQEIRPQATPENGYLWQRVSPQLSSPSQPYSLREALAQAQSSRIGASTRALRESLHPILRQKLELWEENLSAAVSLQVLEVTEKFSTAAASHSIATDYGKLDCITSIFMGFFSRSQPLAFWKALVPVFNSVFNLHGATLMARENDRFLKQVAFHLLRLAVFRNDNIRRRAVVGLQILVRSSFYYFMHTTRLRVMLTITLSELMSDVQVTQMKSDGSLEESGEARRLRKSLEEMADESKSPDLLRECGIPERSLMAVAEGSAENRWSWSEVKYLSDSILQALDASLEHALLASLMTVDRYAAAESFYRLAMAYAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVIMQALVGRNDAVWSRDHMAALRKICPMVSNEITGEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELHHFCASILELIIPVYKSRRAFGQLAKCHTTLTSIYESILEQESSPIPFTDATYYRVGFYGVRFGKLDRKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVNADELQPGVCYLQITAVDPIMEDEDLSSRRERIFSLSTGSMRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLLVVKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL 1850
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00046 1850 PANTHER DEDICATOR OF CYTOKINESIS DOCK 35 1845 IPR026791 GO:0005085(InterPro)|GO:0005085(PANTHER)|GO:0007264(InterPro)|GO:0043547(PANTHER)
Eupl1g00046 1850 Gene3D - 1400 1553 IPR043161 -
Eupl1g00046 1850 Pfam C2 domain in Dock180 and Zizimin proteins 481 649 IPR027007 -
Eupl1g00046 1850 MobiDBLite consensus disorder prediction 87 116 - -
Eupl1g00046 1850 MobiDBLite consensus disorder prediction 298 322 - -
Eupl1g00046 1850 Pfam DHR-2, Lobe B 1616 1698 IPR046770 -
Eupl1g00046 1850 Gene3D C2 domain 483 650 IPR035892 -
Eupl1g00046 1850 CDD DHR2-DOCK 1406 1839 - -
Eupl1g00046 1850 ProSiteProfiles C2 DOCK-type domain profile. 482 641 IPR027007 -
Eupl1g00046 1850 FunFam Guanine nucleotide exchange factor SPIKE 1 1718 1845 - -
Eupl1g00046 1850 MobiDBLite consensus disorder prediction 87 102 - -
Eupl1g00046 1850 Gene3D - 1718 1845 IPR043162 -
Eupl1g00046 1850 Pfam DHR-2, Lobe C 1746 1842 IPR046773 -
Eupl1g00046 1850 Pfam DHR-2, Lobe A 1395 1548 IPR046769 -
Eupl1g00046 1850 SUPERFAMILY ARM repeat 574 1401 IPR016024 -
Eupl1g00046 1850 CDD C2-DOCK180-related 483 633 - -
Eupl1g00046 1850 ProSiteProfiles DOCKER domain profile. 1399 1848 IPR027357 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00046 - -