Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00053 | ATGGCTGAAGTTCTGAGCAAAACCAATCTGTTGTCTCCTTCATGTTCTCCTCATCTCTTCTCCGCTTCTCCCCCCAAGAACTCATCACCGCCTTCCATTACTGGGTTCCCTTCTCTGAAACTCCAACCTCTCAAATCTTCCTCCAATAGCGACTTTCATGGAAGTCAAATCGTTCTCCAACAAGGTGAGAGGGAACCCAAGAGAGGAAATCCCAAAGCTTTGCCAGTCCAGATGAGCCTTTGTATTGGGAAAGCTCAGAAATGGTGGGAGAAGGGGCTTCAACCAAACATGAAAGAGATTACTTCTGCACAAGATCTCGTTGATTCCTTGTCAAACGCAGGAGATAAACTAGTTATTGTGGATTTCTTTTCTCCTGGTTGTGGAGGTTGTAAAGCCCTTCATCCAAAGATCTGTCAATTTGCAGAGATGAACCCAGATGTTCAGTTCCTTCAGGTGAACTACGAGGAGCATAAATCAATGTGTTATAGCCTTAACGTCCATGTTCTCCCCTTCTTCCGGTTTTACAGAGGTGCCCATGGTCGTCTATGCAGCTTCAGCTGCACCAACGCTACTATCAAGAAATTCAAAGATGCACTGGCTAAGCACACCACAGACCGATGCAGCCTTGGACCACCAAAAGGGCTGGAGGAATCAGAGCTCCTCGCTTTGGCTGCAAACAAGGATCTCTCCTTCAACCACACACCAAAGCCAATAGTAGCAAAACCAGTTCCTATCCCTGCACAAGAAGAGAAAGAAGAACCAGCTCCTGCAAACGTAAATATCCCTCTCCCTTCGACCTCCAAAGCCATTAAAGACTCTGAAGAGAAAAGCTTGGTCACAGCTGGGAGATGA | 852 | 46.6 | MAEVLSKTNLLSPSCSPHLFSASPPKNSSPPSITGFPSLKLQPLKSSSNSDFHGSQIVLQQGEREPKRGNPKALPVQMSLCIGKAQKWWEKGLQPNMKEITSAQDLVDSLSNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTTDRCSLGPPKGLEESELLALAANKDLSFNHTPKPIVAKPVPIPAQEEKEEPAPANVNIPLPSTSKAIKDSEEKSLVTAGR | 283 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00053 | 283 | ProSiteProfiles | Thioredoxin domain profile. | 67 | 204 | IPR013766 | - | |
| Eupl1g00053 | 283 | MobiDBLite | consensus disorder prediction | 245 | 283 | - | - | |
| Eupl1g00053 | 283 | MobiDBLite | consensus disorder prediction | 19 | 53 | - | - | |
| Eupl1g00053 | 283 | CDD | TRX-family | 113 | 177 | - | - | |
| Eupl1g00053 | 283 | Gene3D | Glutaredoxin | 88 | 202 | - | - | |
| Eupl1g00053 | 283 | PANTHER | THIOREDOXIN, MITOCHONDRIAL | 68 | 250 | - | GO:0009507(PANTHER)|GO:0045454(PANTHER) | |
| Eupl1g00053 | 283 | MobiDBLite | consensus disorder prediction | 269 | 283 | - | - | |
| Eupl1g00053 | 283 | FunFam | Thioredoxin-like 1-2, chloroplastic | 86 | 204 | - | - | |
| Eupl1g00053 | 283 | SUPERFAMILY | Thioredoxin-like | 86 | 202 | IPR036249 | - | |
| Eupl1g00053 | 283 | Pfam | Thioredoxin | 112 | 179 | IPR013766 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00053 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2197804 | Eupl | Eupl1g00053 | Eupl-Chr1:1708996 | Eupl4g01113 | Eupl-Chr4:17008674 | |
| 2214360 | Eupl | Eupl1g00053 | Eupl-Chr1:1708996 | Eupl11g00792 | Eupl-Chr11:10164457 | |
| 2214395 | Eupl | Eupl1g00053 | Eupl-Chr1:1708996 | Eupl4g01112 | Eupl-Chr4:16996696 | |
| 2214728 | Eupl | Eupl1g00053 | Eupl-Chr1:1708996 | Eupl5g00089 | Eupl-Chr5:1926317 |