Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00069 | ATGGCAAGTATTGCATGTTTCATCATTGTTAGCAAGAATGATATTCCTATATACGAAGCTGAAGTGGGCTCTGCACTTAAAAAAGAAGAAGCTGCTCACCAGCATCAATTCATATTACACGCAGCTTTGGATATTGTTCAGGACCTTGCATGGACTACAAGTGCTATGTTCTTGAAGGCAATGGACAGATTCAATGATTTGGTGGTGTCGGTATATGTTACTGCAGGTCATATCCTACCATACAGGAATCAATGTATAGATGAACTTATCTATTAA | 276 | 38.41 | MASIACFIIVSKNDIPIYEAEVGSALKKEEAAHQHQFILHAALDIVQDLAWTTSAMFLKAMDRFNDLVVSVYVTAGHILPYRNQCIDELIY | 91 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00069 | 91 | CDD | TRAPPC2-sedlin | 4 | 78 | - | - | |
| Eupl1g00069 | 91 | Gene3D | - | 1 | 79 | - | - | |
| Eupl1g00069 | 91 | PANTHER | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 | 1 | 78 | IPR006722 | GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006888(PANTHER)|GO:0006888(InterPro)|GO:0030008(PANTHER) | |
| Eupl1g00069 | 91 | Pfam | Sedlin, N-terminal conserved region | 9 | 78 | IPR006722 | GO:0006888(InterPro) | |
| Eupl1g00069 | 91 | SUPERFAMILY | SNARE-like | 1 | 78 | IPR011012 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00069 | K20301 | trafficking protein particle complex subunit 2 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2193086 | Eupl | Eupl10g00597 | Eupl-Chr10:24067270 | Eupl1g00069 | Eupl-Chr1:2347254 |