AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00074 ATGGTTGATTGCCGGAGCTTGATCGAGTTCTGCAAAGCTTTTGAGCAACACAGGAACATGGCGAATTCCTTAGGCATATCGGATAATCGGAACAACCAGTCTCGCAGTAAGAAGCATAGCAATTCCTTAAGCCCCTTATCCGATCCGTTTTGCGACCATTCGCCATTTGCTGCCATTGACATCATAATATTGATTCTGGTACTCGGTGCATTGGGGGTTCTGACTGTTCCATACTTCAAATTCGTGTTTCGTGAAGCTTCCGAGCTCCTCCCTGTAGCTTGTGTCCTCATTGAAGATGTTATATATAATGCACCTGTTGCTTACATGGTCGGCTTAATTGTAACGTTTGTTATAGTGATTGCCGTGTGGGAGATCGTCCAGCACAAATCTAGGAAGTGTGGGAAACCTTTTTGCAAGGGTCTTCGTAAGGCCGTAGAATTTGATATCCAGCTTGAATCAGAAGAATGTGTGAAGTATTTGCCGCCTGTGCCAATGGACGCGTACGGGGTCCAACCGCTGGAACTAGGGCAGGATCACAAGGAACTAGAGGCAGAGTTGAAAAGGATGGCACCACTCAATGGCCGTACCGTTCTCATCTTTCGAGCGCCTTGCGGATGTCCTGCAGGTTATCTATTAAATGGTGCAGATGGAGAAACTATAGAACATTAG 669 46.34 MVDCRSLIEFCKAFEQHRNMANSLGISDNRNNQSRSKKHSNSLSPLSDPFCDHSPFAAIDIIILILVLGALGVLTVPYFKFVFREASELLPVACVLIEDVIYNAPVAYMVGLIVTFVIVIAVWEIVQHKSRKCGKPFCKGLRKAVEFDIQLESEECVKYLPPVPMDAYGVQPLELGQDHKELEAELKRMAPLNGRTVLIFRAPCGCPAGYLLNGADGETIEH 222
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00074 222 MobiDBLite consensus disorder prediction 24 45 - -
Eupl1g00074 222 PANTHER OS05G0488500 PROTEIN 1 210 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00074 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr1:2518378 Eupl7g01132 Eupl-Chr7:31279703 dispersed
Eupl Eupl-Chr1:2518378 Eupl11g00777 Eupl-Chr11:9969544 wgd
Eupl Eupl-Chr1:2518378 Eupl4g01095 Eupl-Chr4:16759732 wgd
Eupl Eupl-Chr1:2518378 Eupl5g00111 Eupl-Chr5:2712797 wgd