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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00076 ATGCCTGTGACGTTTATAAACTGGTGGCACGAGTTGACCTGGGAATGTTGGAGTCCATGGACCATGATCAAATACCCACGGCCTACTCGAGCTGAAGCCACTGATGTAGCCAATGCAGTTCTTGCTGTTCAAACCATGGCCAAGATTTGCATAGAAGTCGAGTTCACCCTTCATTACAGAGCTGTCTTTAAAGGGATTATGGAAGCTGCACCAGTGCCCATGAGCCCATCACAGAGCCTGGCTTCCTCGGCAGTACGAACAGCCAACTCTGCTAAAGCGGTTCTCATTTTGGTCCTGACCAGAGGTGGAAGCGCTGCCGAGCTGGTGGCCAAGTACAGGCCAGCTATGCCAATCCTGTCTGCGGTAGTATCTGAGATAAAGACAGATTCCTTTGATTGGTCATGCAGCGATGAAGCTCCGGATAGGCAGTCTTATTTCCCGCGGGTTGGTGCCTGTCTTGAGTGCAGGATCTGCAATGGCTTCTTCGACAGCGTCAACAGAAGAAACACTAGAATTTTCCTTCAACATGCCAAGGCAAATGGACTCTGA 549 50.27 MPVTFINWWHELTWECWSPWTMIKYPRPTRAEATDVANAVLAVQTMAKICIEVEFTLHYRAVFKGIMEAAPVPMSPSQSLASSAVRTANSAKAVLILVLTRGGSAAELVAKYRPAMPILSAVVSEIKTDSFDWSCSDEAPDRQSYFPRVGACLECRICNGFFDSVNRRNTRIFLQHAKANGL 182
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00076 182 SUPERFAMILY PK C-terminal domain-like 42 124 IPR036918 -
Eupl1g00076 182 Gene3D - 21 38 IPR040442 -
Eupl1g00076 182 Gene3D - 39 137 IPR036918 -
Eupl1g00076 182 Pfam Pyruvate kinase, alpha-beta domain 79 125 IPR015795 -
Eupl1g00076 182 PANTHER PYRUVATE KINASE 41 126 IPR001697 GO:0000287(InterPro)|GO:0004743(InterPro)|GO:0004743(PANTHER)|GO:0005737(PANTHER)|GO:0006096(InterPro)|GO:0006096(PANTHER)|GO:0030955(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00076 K00873 pyruvate kinase [EC:2.7.1.40]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197819 Eupl Eupl1g00076 Eupl-Chr1:2599603 Eupl4g02234 Eupl-Chr4:52917165
2214740 Eupl Eupl1g00076 Eupl-Chr1:2599603 Eupl5g00115 Eupl-Chr5:2822337