AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00080 ATGGAGAGACGGGTGGCAATCATCGGAGCCGGGATCAGTGGCCTTGTCGCCTGTAAATACACCGTAGAGAAGGGTTTCCGTCCGACCGTGTTCGAAACAAAATCCGGCGTCGGAGGAGTCTGGACTCACACAGTAGAGACTACTAAGCTCCAGACTCCTAAAGAAGAATATGAATTCTCAGACTTCCCATGGCCTTCTTCAGTGATCGAAGAGTTCCCTAATCACCATGAAGTCATGGAGTATCTCGAAGCATATGCTCGTCGTTTCGACATACTTCCGCACATCAAATTCAATTCTAAAGTCATTGGCATTCAGTACGAGGGACCATCCGATGAAGAGATGGTGTCATGGAGTCTCTGGGGTGGCACCGGTGATCCCTTCAGTCCTAGAGGGAAATGGAACATTACCGTGCAGGATACCCAGCATCACTCCACTGAGGTTTACCAGGTGGAATTCGTAATCCTTTGCATGGGACGGTTCAGCGATCTTCCAAATATTCCCGATTTTCCGCCAAATAGAGGCCCAGAAGCATTTGATGGTAAGGTGATACACTCTAAGGACTACTCGGCCATGGATGATGCTAGTGCTGCTGAATTCGTCAAAGGAAAGCGGGTTACAGTCGTCGGATTTCAGAAATCAGCTCTGGACATTGCAACCGAATGCTCAATAGCAAATGGGGTGGAGTACCCTTGTACACTGATGTACAAGACTGAACATTGGAACGTTCCAAATTACAGTCCATGGGGTGTACCTCTTGCATATCTATACCTCAATCGTTTCTCAGAGCTTATGGTCCATAAGCCCGGCGAAGGGCTCCTACTCAGTCTCTTGGCAACCCTGCTTTCACCTCTGAGATGGGCATTTTCGAAATTTGTCGAGAGCTATATCAAATGGAAACTTCCTCTGAAGAAGTTCGGAATGATACCGAAACACAGTTTCCTCCAAGAAATGTCTTCTTGTTTGATCTCAATTGTACCGGATAACTTCTATGACACAGTGGGAGAGGGAAGCATCGTTTTGAAGAAAGCGAAGAGTTTTAGCTTCTGCAAAAATGGATTGATGATTGACGGAGACGTTGCACCTCTAGAGACAGATATCGTGATCCTTGGCACTGGGTACAAGGGCGATGAAAAGCTCAAAAACATTTTCGAATCCCCCGCCTTTCAGAAATATATAATGGGGTCATCAACAACGGTCCCACTCTATAGAGAATGCATTCATCCTCGTATTCCGCAACTGACAATAATTGGATATTCCGGAGAGTCTCTCAAATCTTTATACTTCGGAGAGGAGGTGTCGGTGGCTCGCACATCTACTCGAGGGGACGTTCAAGTTGCCGAGTATAAAAGAAATGGAAGAGAATGTGCTGAGATGGGAGAAATTCATGAAGCTATACTCCGGCGAGTACTATCGGAGATCTTGTTTGGGTGTCCTGCATATATGGTACAATGA 1452 46.35 MERRVAIIGAGISGLVACKYTVEKGFRPTVFETKSGVGGVWTHTVETTKLQTPKEEYEFSDFPWPSSVIEEFPNHHEVMEYLEAYARRFDILPHIKFNSKVIGIQYEGPSDEEMVSWSLWGGTGDPFSPRGKWNITVQDTQHHSTEVYQVEFVILCMGRFSDLPNIPDFPPNRGPEAFDGKVIHSKDYSAMDDASAAEFVKGKRVTVVGFQKSALDIATECSIANGVEYPCTLMYKTEHWNVPNYSPWGVPLAYLYLNRFSELMVHKPGEGLLLSLLATLLSPLRWAFSKFVESYIKWKLPLKKFGMIPKHSFLQEMSSCLISIVPDNFYDTVGEGSIVLKKAKSFSFCKNGLMIDGDVAPLETDIVILGTGYKGDEKLKNIFESPAFQKYIMGSSTTVPLYRECIHPRIPQLTIIGYSGESLKSLYFGEEVSVARTSTRGDVQVAEYKRNGRECAEMGEIHEAILRRVLSEILFGCPAYMVQ 483
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00080 483 Gene3D - 1 173 IPR036188 -
Eupl1g00080 483 FunFam Flavin-containing monooxygenase 2 270 - -
Eupl1g00080 483 SUPERFAMILY FAD-NAD(P)-binding domain 2 223 IPR036188 -
Eupl1g00080 483 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Eupl1g00080 483 Gene3D - 174 253 IPR036188 -
Eupl1g00080 483 PRINTS Flavin-containing monooxygenase (FMO) signature 183 197 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl1g00080 483 PRINTS Flavin-containing monooxygenase (FMO) signature 27 51 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl1g00080 483 PRINTS Flavin-containing monooxygenase (FMO) signature 3 19 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl1g00080 483 PRINTS Flavin-containing monooxygenase (FMO) signature 132 148 IPR000960 GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl1g00080 483 Pfam Flavin-binding monooxygenase-like 3 417 IPR020946 GO:0004499(InterPro)|GO:0050660(InterPro)|GO:0050661(InterPro)
Eupl1g00080 483 PANTHER DIMETHYLANILINE MONOOXYGENASE 3 422 IPR050346 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00080 K00485 dimethylaniline monooxygenase (N-oxide forming) / hypotaurine monooxygenase [EC:1.14.13.8 1.8.1.-]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197822 Eupl Eupl1g00080 Eupl-Chr1:2736016 Eupl3g02391 Eupl-Chr3:55408792
2210419 Eupl Eupl1g00080 Eupl-Chr1:2736016 Eupl10g01274 Eupl-Chr10:32910250