Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00082 | ATGACAAGTTTAGATGAAGGTAAAGGAGATAGGTTTCTGAAATTGGGTGGGAAGAAATTGCCAGATTTTGATGATTATTTGAACGTTGCGGATGCGACGAAATGCAAAGAGAGATGTGTGAAAAATTGCTCATGTGTGGCGTATGCTTATGTTAGCGGAATCAGGTGTATGGTGTGGGGCAGAGAGCTAATCGATGTTCGGCAGTTCCCTTCGGGTGGGGAAGAGCTTTTCCTCTGTCTTGCTTCTGACCTTGGTGGAAGTGTTGGGTCTACTTTGCAGTTGATATTAGGTTATATTATCTACGCAGTAGTAGTAGTAGGAACGTAG | 327 | 43.43 | MTSLDEGKGDRFLKLGGKKLPDFDDYLNVADATKCKERCVKNCSCVAYAYVSGIRCMVWGRELIDVRQFPSGGEELFLCLASDLGGSVGSTLQLILGYIIYAVVVVGT | 108 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00082 | 108 | PANTHER | BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN | 8 | 87 | - | - | |
| Eupl1g00082 | 108 | Pfam | PAN-like domain | 8 | 66 | IPR003609 | - | |
| Eupl1g00082 | 108 | SMART | ntp-6 | 7 | 80 | IPR003609 | - | |
| Eupl1g00082 | 108 | SUPERFAMILY | Hairpin loop containing domain-like | 10 | 65 | - | - | |
| Eupl1g00082 | 108 | CDD | PAN-AP-plant | 6 | 81 | - | - | |
| Eupl1g00082 | 108 | ProSiteProfiles | PAN-Apple domain profile. | 7 | 81 | IPR003609 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00082 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:2756241 | Eupl6g00694 | Eupl-Chr6:11028068 | dispersed | |
| Eupl | Eupl-Chr1:2744483 | Eupl1g00082 | Eupl-Chr1:2756241 | tandem |