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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00091 ATGGGTTGGAGATACAGGGCTAGATTGTTCCTCATTGACGCTATTGTGGTCACCAGGTGGTTGTTGCTCCAATTCTGCTGGGTTCTTACATGCAAAGCACATTTTCAGATACTGAAAATCTTTACGTCTTTTAAACCACCTCTTACTTGGATGCAGATAATGGTATGCAATAACCACATGAACATTCAAGATGAGGTTGACCAAGTGGTTATACATGAGCTGATCCATCTTTACAACGATTGTCGGGTTGCGAACTTGGATGTTCGACATTGTTCTCATTTTGGATTCGGCAAATTTTCTTCATTTTATTTCATTTACGAGATGCGTTTTATGTTTCAATGTTTGATACATTGTGAGGCATTTGGAAGTTTATTATTGCCTTTACTCATAAATCATTCAGTATAG 405 37.78 MGWRYRARLFLIDAIVVTRWLLLQFCWVLTCKAHFQILKIFTSFKPPLTWMQIMVCNNHMNIQDEVDQVVIHELIHLYNDCRVANLDVRHCSHFGFGKFSSFYFIYEMRFMFQCLIHCEAFGSLLLPLLINHSV 134
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00091 134 Pfam Peptidase M76 family 43 93 IPR019165 GO:0004222(InterPro)
Eupl1g00091 134 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE 39 93 IPR019165 GO:0004222(InterPro)|GO:0033615(PANTHER)|GO:0034982(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00091 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr13:36135134 Eupl1g00091 Eupl-Chr1:2977399 dispersed
Eupl Eupl-Chr1:2977399 Eupl1g01748 Eupl-Chr1:39140380 dispersed