Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00098 | ATGAAAAACATTCCTGTGCTGTTGATGGGCTGTGGAGGTGTGGGGAGACAGCTCCTTCAACACATAGTCAGCTGCAGATCTCTTCACGCCAAACAGGGACTGTTCTTGCGAGTCGTGGGAGTATGCGACAGTAAATCGCTACTCATCGCCTCTGATGTGCTCACAATGGACTTAAATGACGCCTTCTTGATGGAAATTTGCCGCGTTAAGTCCTCTGGCTCTTCTCTGTCCACGCTTAGTGGCTTCGGTGAATGCCAAATATTCACAAACTTGGAATCAACAAGAAAATTTATAGATATCGCGGCCCTTCTGGGCAGATCAACTGGTTTGGCATTTGTTGATTGCTCTGCCAGTTCCGAGACCATTGGAGTTCTAACACGGGTTGTTGATTTGGGTTGTTGCATTGTGCTGGCAAATAAGAAGCCTCTCACATCTGGAATGGAAGATTATGAGAAGTTGGTCTCTCATCCACGTCGCATTCGACATGAATCAACGGTTGGTGCTGGCCTTCCTGTGATAACTTCCTTAAACCGTATACTTGCATCTGGAGACCCCATCAATTGTATCATTGCGAGTTTGAGTGGCACATTAGCGTTTGTAATGAGTGAAGTTGAAGATGGAATGCCATTCAGCGAAGTTGTTAAAGCAGCTAAATGCCTTGGATACACAGAACCAGATCCGCGGGATGACCTTAGTGGAATGGATGTTGCAAGAAAGGCTTTGATCCTTGCTCGGCATCTTGGGTGGCGGATTAATTTGGATAACATTAAAGTTGATAGCTTGTATCCTGATGAAATGGGCCCTAATACAATGTCTGTGGAAGATTTTTTGGCCAATGGACTTCCATCACTGGATAAAAAAATTGAAAAGAGTATTGAAGTGGCTTCTGAAGATGGGAATGTGCTCCGTTATGTCTGTACGATTGAGGGATCAAGATGTTGGATTGGCATTAAACAAGTTCCAAAAAATTCTCCTTTGGGGAGACTGAGAGGAAGTGATAATGTGTTGGAGATATACAGCAGGTGTTACAATGACTTGCCGTTGGTGATCCAAGGTGCTGGAGCAGGTAACGACACTACAGCAGCAGGAGTCCTTGCCGATATCCTTGATCTTCAGGATCTTTTCCCTTGA | 1131 | 44.92 | MKNIPVLLMGCGGVGRQLLQHIVSCRSLHAKQGLFLRVVGVCDSKSLLIASDVLTMDLNDAFLMEICRVKSSGSSLSTLSGFGECQIFTNLESTRKFIDIAALLGRSTGLAFVDCSASSETIGVLTRVVDLGCCIVLANKKPLTSGMEDYEKLVSHPRRIRHESTVGAGLPVITSLNRILASGDPINCIIASLSGTLAFVMSEVEDGMPFSEVVKAAKCLGYTEPDPRDDLSGMDVARKALILARHLGWRINLDNIKVDSLYPDEMGPNTMSVEDFLANGLPSLDKKIEKSIEVASEDGNVLRYVCTIEGSRCWIGIKQVPKNSPLGRLRGSDNVLEIYSRCYNDLPLVIQGAGAGNDTTAAGVLADILDLQDLFP | 376 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00098 | 376 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1 | 189 | IPR036291 | - | |
| Eupl1g00098 | 376 | FunFam | Bifunctional aspartokinase-homoserine dehydrogenase | 182 | 353 | - | - | |
| Eupl1g00098 | 376 | FunFam | Homoserine dehydrogenase | 6 | 201 | - | - | |
| Eupl1g00098 | 376 | ProSitePatterns | Homoserine dehydrogenase signature. | 217 | 239 | IPR019811 | GO:0006520(InterPro) | |
| Eupl1g00098 | 376 | PIRSF | HDH-short | 1 | 376 | IPR022697 | GO:0004412(InterPro) | |
| Eupl1g00098 | 376 | Gene3D | - | 5 | 371 | - | - | |
| Eupl1g00098 | 376 | SUPERFAMILY | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 171 | 356 | - | - | |
| Eupl1g00098 | 376 | Pfam | Homoserine dehydrogenase | 171 | 369 | IPR001342 | GO:0006520(InterPro) | |
| Eupl1g00098 | 376 | PANTHER | - | 2 | 375 | IPR011147 | GO:0004412(InterPro)|GO:0009067(InterPro) | |
| Eupl1g00098 | 376 | Gene3D | Dihydrodipicolinate Reductase; domain 2 | 182 | 353 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00098 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr12:3556447 | Eupl1g00098 | Eupl-Chr1:3242902 | dispersed | |
| Eupl | Eupl-Chr1:3242902 | Eupl9g01504 | Eupl-Chr9:32185173 | dispersed | |
| Eupl | Eupl-Chr1:3242902 | Eupl3g00101 | Eupl-Chr3:2873676 | transposed |