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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00106 ATGTCATCCCTAAGAAATGCTATCAGTAGACGTGCTCACAAGGAACGAGATCAGCCGCGTTTTAGGAAAAAGTTTGGGCTTCTCGAGAAGCACAAAGACTATGTGGTGCGGGCTCAGGCATTCCACAAAAAACAGGAGTCTTTACAGAAACTCAAGGAGAAAGCAGCATTCAGGAACCCAGATGAGTTTTATTTTAAGATGATTAAAACAAGAACTGTGAGAGGAGTCCATAAACCAGAGAGTCAGGCAAACAAATACACTGAAGAGGAACTCATGCTGATGAAGACGCAAGATATAGGATATGTCCTTCAGAAAGTTCAAAGTGAAAAGAAGAAAATTGATAAGCTAAGTTCCATGCTGCATTCTCTTGATAATCAACCACCAAACAAACATATTTACTATGCTGAAGACAGGGAAGAGGCTAAAGAAATACGATCACAATCTTTGCGTGGGGGAAAGTTACCTGCCTCTGAGAATGTCCCAGATAATATTAAAAGGAAATCAACTTCTTCTTACAGAGAGCTGGAGGCGAGGAAGAAGAGGGCAAATGAACTGGAGAAAGTGTACATGGACATGGCCTTGCAGAAGGAACTACAGCAGAAAAAGGGTCGGAAACGCAAACTCCGTGAAGACGAGATTGTTTGTCCAACCACCAGACCCGTTTATAAATGGCGAACAGAGCGAAAGCGGTGA 693 42.57 MSSLRNAISRRAHKERDQPRFRKKFGLLEKHKDYVVRAQAFHKKQESLQKLKEKAAFRNPDEFYFKMIKTRTVRGVHKPESQANKYTEEELMLMKTQDIGYVLQKVQSEKKKIDKLSSMLHSLDNQPPNKHIYYAEDREEAKEIRSQSLRGGKLPASENVPDNIKRKSTSSYRELEARKKRANELEKVYMDMALQKELQQKKGRKRKLREDEIVCPTTRPVYKWRTERKR 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00106 230 Coils Coil 106 126 - -
Eupl1g00106 230 PANTHER U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 1 230 IPR007144 GO:0005730(PANTHER)|GO:0006364(InterPro)|GO:0032040(PANTHER)|GO:0032040(InterPro)
Eupl1g00106 230 Coils Coil 165 185 - -
Eupl1g00106 230 Coils Coil 191 211 - -
Eupl1g00106 230 MobiDBLite consensus disorder prediction 145 164 - -
Eupl1g00106 230 PIRSF U3snoRNP11 1 150 IPR007144 GO:0006364(InterPro)|GO:0032040(InterPro)
Eupl1g00106 230 PIRSF U3snoRNP11 151 230 IPR007144 GO:0006364(InterPro)|GO:0032040(InterPro)
Eupl1g00106 230 MobiDBLite consensus disorder prediction 1 21 - -
Eupl1g00106 230 Pfam Utp11 protein 10 230 IPR007144 GO:0006364(InterPro)|GO:0032040(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00106 K14769 U3 small nucleolar RNA-associated protein 11