Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00108 | ATGGAAGAGAACCAGGCAAACAGTTCGAGGCGGAGAGAGTGGTGCGATCTTCCAATCGAGCTTCTGCTATTAACATGTGCACATCTCTCCGTTCTCGATCGCCTCTCTATCCGTTCCGTCTGTCGGGGTTGGCGCTCGGCTTCCTCTCAGTGTCTCCTGGAAAATCAACCACGAGACCAACCACCTTGGATCATGTTCTTGAAGGACTACGATTTAACTAGTGATAAATTGGTGGACTCATCTACCAACCGTCGCTACACCATCCATATTCCAGAATTGCAAGGGAGGACTAGAGTGCTCTTGTCGAGGCACGGCTGGCTCTTACTACGTTCATTTTCCAAGAAAAACCGTTCGCCTTTCTTCTTTAATCCCTTCTCTAGAGCAAGAATTGATCCCCCTTATTTAAATTTAGCTGGATCAGTTATGACCACCTTCGCTCTCTCTGCTCCTCCTACATCCCAAGATTGCATCCTATTTGCCATCGGTATGTTATTTTCCGATCGTCAAACTTTCAGTATTAGTACCTGTCGCCGTGGGGAAGACAAATGGACTACAAACATGTATCAAAATAATCAGCTCCATGGACAGAGAGTTCTTAACGTGGTGTTTTCTAAGGGGATCTTCTATTGCTTCCATATAGGAGGAGAGGTGAGCGTTTTCAACGTTGAAAACTATACTTGGGAATGTTTGGGAAGTCCGTTTGATCATATGAGAGGAGCTTCTCTCTTTCTATCGTATGGGATTGAGCGCTGTGACGGGAAAGTAATTCTATATCTTGAACGCAAAGATCATTCTCTTCATAAGGTTATATTGGAGGGAATACAGAGGCGAAGAGTGGTGAAGGACACGAAGGAACTGCCTGTGCCTGTACCTACAATAGATGACGGAGGAGGTCTTCTTTTTCTCACTGTAGATGAAGAAATTGCACAGACACAGAACAAGGACAAGCTTGTCATTTTAGGCTCATGTCACGGCAAGTATGATCCAGATACTGGTTTAATAACTTTTCACTGGCGCTACTCGAATATTGAACAGATATACCGTAATTGCAACTGTAAAAATGCTATTTGGATTGAACCCAAGTGGGTTTCCCCTTCCCCTAGCCTTACTTGGACTACCTAA | 1122 | 44.47 | MEENQANSSRRREWCDLPIELLLLTCAHLSVLDRLSIRSVCRGWRSASSQCLLENQPRDQPPWIMFLKDYDLTSDKLVDSSTNRRYTIHIPELQGRTRVLLSRHGWLLLRSFSKKNRSPFFFNPFSRARIDPPYLNLAGSVMTTFALSAPPTSQDCILFAIGMLFSDRQTFSISTCRRGEDKWTTNMYQNNQLHGQRVLNVVFSKGIFYCFHIGGEVSVFNVENYTWECLGSPFDHMRGASLFLSYGIERCDGKVILYLERKDHSLHKVILEGIQRRRVVKDTKELPVPVPTIDDGGGLLFLTVDEEIAQTQNKDKLVILGSCHGKYDPDTGLITFHWRYSNIEQIYRNCNCKNAIWIEPKWVSPSPSLTWTT | 373 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00108 | 373 | PANTHER | OS09G0392200 PROTEIN | 3 | 235 | IPR044619 | - | |
| Eupl1g00108 | 373 | Pfam | Domain of unknown function (DUF295) | 62 | 229 | IPR005174 | - | |
| Eupl1g00108 | 373 | CDD | F-box-SF | 16 | 49 | - | - | |
| Eupl1g00108 | 373 | SMART | fbox-2 | 17 | 56 | IPR001810 | GO:0005515(InterPro) | |
| Eupl1g00108 | 373 | SUPERFAMILY | F-box domain | 6 | 52 | IPR036047 | GO:0005515(InterPro) | |
| Eupl1g00108 | 373 | Pfam | F-box domain | 14 | 51 | IPR001810 | GO:0005515(InterPro) | |
| Eupl1g00108 | 373 | Gene3D | - | 13 | 52 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00108 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr12:27866198 | Eupl1g00108 | Eupl-Chr1:3568897 | dispersed | |
| Eupl | Eupl-Chr1:3568897 | Eupl7g01290 | Eupl-Chr7:33426901 | dispersed |