Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00117 | ATGGTTGCTCCTCTAGTAGCAGGTGTTTCTGTGGCAGCTGCTGCCTTGGGAGGCCGATATATGATCCAGGCATGGCAAGCATTCAAAGCTCGCCCTGCTGTACCCCGGATGCGCAGATTTTATGAGGGTGGATTTGACCGGGTCATGACGAGACGAGAAGCTGCATTAATCCTTGGCGTCAGAGAGCATGCAGTGATGGAGAAGATCAAGGAGGCCCACAGGAGAGTGATGGTGGCAAACCACCCTGACAGTGGTGGGAGCCATTATCTTGCTTCCAAGATCAACGAGGCTAAGGATATCTTGATGGGGAAAACAAAGGGGAGTGGGTCCGCATTCTAG | 339 | 52.8 | MVAPLVAGVSVAAAALGGRYMIQAWQAFKARPAVPRMRRFYEGGFDRVMTRREAALILGVREHAVMEKIKEAHRRVMVANHPDSGGSHYLASKINEAKDILMGKTKGSGSAF | 112 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00117 | 112 | ProSiteProfiles | dnaJ domain profile. | 53 | 106 | IPR001623 | - | |
| Eupl1g00117 | 112 | CDD | DnaJ | 57 | 101 | IPR001623 | - | |
| Eupl1g00117 | 112 | Gene3D | DnaJ domain | 39 | 106 | IPR036869 | - | |
| Eupl1g00117 | 112 | PANTHER | UNCHARACTERIZED | 1 | 108 | - | GO:0001405(PANTHER)|GO:0001671(PANTHER)|GO:0030150(PANTHER) | |
| Eupl1g00117 | 112 | SMART | dnaj-3 | 52 | 106 | IPR001623 | - | |
| Eupl1g00117 | 112 | FunFam | Import inner membrane translocase subunit tim14 | 39 | 105 | - | - | |
| Eupl1g00117 | 112 | SUPERFAMILY | Chaperone J-domain | 43 | 104 | IPR036869 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00117 | K09539 | DnaJ homolog subfamily C member 19 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:4132031 | Eupl2g01333 | Eupl-Chr2:30138484 | dispersed | |
| Eupl | Eupl-Chr1:4132031 | Eupl5g01498 | Eupl-Chr5:38448311 | transposed |