AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00128 ATGGAAGGGGGATCCCCTGACCAAGAATCAGTAGGGTCTGGGACAAAAAGGTCCAGTGTGTCATCAGGAGGTAGGCCTCGGAGTCGTAAAGAATTTCTTCGGAAATTTGTGGACAGCAAAATCCTGACAGCAAAGCTTGAGGAGTGGTTTTATGCAATATCAGAAAAATCAGCAAGTAAAAAGCCTGCCTTTGACGTTCCTTTTGAGTTGACAGAACTTCAAAAGTTTGATTATGCATTGGAAGGGGTTTCATTTCAGCAGTTGACTCGGATGCCCAATGCTGTTTATGCTTCAACATCGGATGCTGTTGAAGCAACTGCGTATCTTGCCATTGAGGATTTCCTACATGCAAGTGTGCAGGGCTTGTGGGATGCATTTTGGAGTCAAAGTGGGACTATGCCTTTCTCTGTTGCCTGTCTACACAGTTCGAGCTTGAAATTCTATCCAGCTGAGAAAGCGATTGCAAGTGGAAAGCTTGAAGGTCTTTGTGCCACTGCTATAATGCTGAAGAACACTCGACATCCGCATGGGAAGTGGGACCATATTCTTGAACTAGCATTGCTGAGGCCCGATGTCGGGAGCCTTGTAATGGAGAGTGACCGGAAGCCTTCTCTTGCTGTTCTGGGGGAAGCCCTCTTCTTTGCTCTCCGTATACTATTGTCAAGAAGCCTAAGCAGATCTAATGTTCTTCACAGTTGTAACTCTGTCTTTGTGCTTCTTGTTGATTCTCAATATGGTGGGGTGGTAAAAGTTGAAGGGGATGTGAATAAATTGGATTTTGACGTGAACAATGTTTATGAATCTGCTGCTGAATGGATAAGAAAACATTCACAAATTGCAGTTTCTCCCATTGATAGGATCTGGAACAAGCTTGGGAATGCCAACTGGGGAGATATTGGTGCTCTACAGGTGCTTCTGGCGACCTTCCATTGTATTGTTCAATTTGCTGGAATGCCAAAGCATTCGGTTGAAGATTTAGCTGGTGATCATGGTTCCCGTCTCCAGATCCGCAGAACCGAAAGGCAATTGGGGGACACCAGAGTGAATGGAAACGGTTTATTCCGGTTCCAACACCGCAGTGCTTCTCCTGAAATTGTTGAAGTCCAGGATGAATCCAAAGAGGTAATGAAGCTAGAGGCAGCATCTGTTTTGTGGCTGGAGGATTCGAATTGTCAAAAGGGTTTTCAGATTAATGAAGTTTTGAGTGATGGTGAACTTCCATTTTACAGTGCAACTTCAGTAGAACAACCAGGAAAGGCTCTATTCTTGTGTGTTGGTTCTCATCCTTCTCAGCTAGAGCCAGCTTGGGAGGATATGAACTTATGGTATCAAGTTCAGAGGCAGACTAAAATATTGACTGTCATGAAACAGAGAGGTCTCTCTAGCAAGTATCTTCCTCAGCTGGTTGCATCCGGCAGGATAATTCACCCTGGACAGTGTCGGAGACCGAGCTCTGGTGGAAATTGTGACCACCCTTGGTGTGGGACCCCAATCCTCGTAACCAGCCCAGTTGGCAAATCAGTTGCAGACCTGGTAAGAGATGGGCGATTTGGATCAGATGAGGCTATCAGGTGTTGCCATGACTGCTTATCAGCCCTGTCAACTTCAGCTTCTGCTGGAATCCGGCATGGAGACATCCGTCCAGAGAATGTGATCCGTGTGAATTCTGGTGTGAGGCATCCGTATTATGTTCTTGTTGGCTGGGGGCATGCCATATTAGAAGAGAGGGATCGCCCGGCCATGAATCTTCACTTCTCGTCAACGCATGCTCTTCAGGAAGGGAAGCTGTGCTCAGCTTCAGATGCAGAGAGCCTGATCTACTTGCTTTATTTTTCATCTGGTGGGGTTTTGCCAGACTTGGATTCAGTAGAGGGGGCACTGCAGTGGAGAGAGGCCTCGTGGTCAAGAAGGTTGATTCAGCAGAAGCTTGGGGACATGTCAGCTGTGCTGAAAGCCTTTGCTGATTATGTGGACAGTCTTTGTGGGACACCCTATCCTATGGACTATGAGATATGGCTGAGAAGGATGAGGAGAAATGTTCATGAAGAAGATCATGGGAAGGAAATCGACACGATGGGTTAG 2082 46.54 MEGGSPDQESVGSGTKRSSVSSGGRPRSRKEFLRKFVDSKILTAKLEEWFYAISEKSASKKPAFDVPFELTELQKFDYALEGVSFQQLTRMPNAVYASTSDAVEATAYLAIEDFLHASVQGLWDAFWSQSGTMPFSVACLHSSSLKFYPAEKAIASGKLEGLCATAIMLKNTRHPHGKWDHILELALLRPDVGSLVMESDRKPSLAVLGEALFFALRILLSRSLSRSNVLHSCNSVFVLLVDSQYGGVVKVEGDVNKLDFDVNNVYESAAEWIRKHSQIAVSPIDRIWNKLGNANWGDIGALQVLLATFHCIVQFAGMPKHSVEDLAGDHGSRLQIRRTERQLGDTRVNGNGLFRFQHRSASPEIVEVQDESKEVMKLEAASVLWLEDSNCQKGFQINEVLSDGELPFYSATSVEQPGKALFLCVGSHPSQLEPAWEDMNLWYQVQRQTKILTVMKQRGLSSKYLPQLVASGRIIHPGQCRRPSSGGNCDHPWCGTPILVTSPVGKSVADLVRDGRFGSDEAIRCCHDCLSALSTSASAGIRHGDIRPENVIRVNSGVRHPYYVLVGWGHAILEERDRPAMNLHFSSTHALQEGKLCSASDAESLIYLLYFSSGGVLPDLDSVEGALQWREASWSRRLIQQKLGDMSAVLKAFADYVDSLCGTPYPMDYEIWLRRMRRNVHEEDHGKEIDTMG 693
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00128 693 PANTHER KINASE FAMILY PROTEIN 3 692 - -
Eupl1g00128 693 SUPERFAMILY Protein kinase-like (PK-like) 456 677 IPR011009 -
Eupl1g00128 693 Gene3D Transferase(Phosphotransferase) domain 1 396 691 - -
Eupl1g00128 693 MobiDBLite consensus disorder prediction 1 29 - -
Eupl1g00128 693 MobiDBLite consensus disorder prediction 8 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00128 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr13:19623431 Eupl1g00128 Eupl-Chr1:4374009 dispersed
Eupl Eupl-Chr1:4374009 Eupl5g00189 Eupl-Chr5:5064421 wgd