Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00133 | ATGAGCCGACACCCAACTGTGAAGTGGGCCCAGAGTTCCGACAAGATCTACCTCACCGTTGAGCTATCTGATGCCAAAGATGTAAAGCTCAAGCTCGAGCCTGAAGGAAGGTTCATCTTCTCTGCCACCAAAGACAGTGTACCATATGAAGTCGACATTGAGTTGTATGATAAGATCAATGTTGAGGAGAGTAAAGTTAGTATTGGTGTAAGGAACATTGTGTATGTTATAAAGAAAGCTGACAAGAAATGGTGGGGAAGGCTACTTAAGCCGGAAGGAAAACCACCTGTGTTCCTCAAAGTGGATTGGGATAAATGGGTTGATGAAGATGATGAGAATGAGAAAGCTGGAATGGACTTTGATGGTATGGATTTCTCAAAGTTAGACATGGGTGGGGATGATTTTGATATTGATGAACCAAATGATGAGGAAGAAGCCGTCGAAACAAAAGAGGAGGAAATCAAGAAGGAAGGAGAACCCGTTGCAGTGGATCCTGAAGAGGCTAAGGCTTGA | 513 | 43.66 | MSRHPTVKWAQSSDKIYLTVELSDAKDVKLKLEPEGRFIFSATKDSVPYEVDIELYDKINVEESKVSIGVRNIVYVIKKADKKWWGRLLKPEGKPPVFLKVDWDKWVDEDDENEKAGMDFDGMDFSKLDMGGDDFDIDEPNDEEEAVETKEEEIKKEGEPVAVDPEEAKA | 170 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00133 | 170 | FunFam | Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase | 2 | 124 | - | - | |
| Eupl1g00133 | 170 | MobiDBLite | consensus disorder prediction | 149 | 170 | - | - | |
| Eupl1g00133 | 170 | MobiDBLite | consensus disorder prediction | 114 | 170 | - | - | |
| Eupl1g00133 | 170 | ProSiteProfiles | CS domain profile. | 2 | 89 | IPR007052 | - | |
| Eupl1g00133 | 170 | Pfam | CS domain | 5 | 79 | IPR007052 | - | |
| Eupl1g00133 | 170 | MobiDBLite | consensus disorder prediction | 114 | 134 | - | - | |
| Eupl1g00133 | 170 | CDD | p23-hB-ind1-like | 5 | 111 | - | - | |
| Eupl1g00133 | 170 | PANTHER | TELOMERASE-BINDING PROTEIN P23 HSP90 CO-CHAPERONE | 1 | 145 | IPR045250 | GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0006457(PANTHER)|GO:0051087(PANTHER)|GO:0051131(PANTHER)|GO:0051879(PANTHER)|GO:0051879(InterPro) | |
| Eupl1g00133 | 170 | SUPERFAMILY | HSP20-like chaperones | 1 | 136 | IPR008978 | - | |
| Eupl1g00133 | 170 | Gene3D | - | 2 | 125 | IPR008978 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00133 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr13:33513171 | Eupl1g00133 | Eupl-Chr1:4447322 | dispersed | |
| Eupl | Eupl-Chr1:4447322 | Eupl7g01376 | Eupl-Chr7:34809761 | dispersed | |
| Eupl | Eupl-Chr1:4447322 | Eupl12g01031 | Eupl-Chr12:26540119 | transposed |