Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00136 | ATGCAACCCCTCAAAGCCCCTGGGCCAGACGGCCTTCAGACCTTCTTTTTCCAAAACTATTGGGAGACCATGGGCAAGAGTCTGATCGATATGGTGCAAAACTTCTTCGACTCAAGCCACCTCCTCAAAGAAATAAACAAAACTTTCATCACCCTTATTCCCAAAACCCAATCCCCAAAGAATGCTCACCATTTCAGACCTATCAGCCTTTGCAACGTCTCCTACAAGGTTATGTCTAGAATCATTGTGAATAGGCTGAGACCTATCATACACAGCATGATCTCTCCTTTTCAAGGGGCTTTCGTGGCCAACAAACAAATCTCCGACAACATCCTCATAGCTCACAAAATTGTGAATACTTTCAAAAGCAAAAAAGGGAGCTACAGGATGGATGGGCATCAAACTTGA | 408 | 44.12 | MQPLKAPGPDGLQTFFFQNYWETMGKSLIDMVQNFFDSSHLLKEINKTFITLIPKTQSPKNAHHFRPISLCNVSYKVMSRIIVNRLRPIIHSMISPFQGAFVANKQISDNILIAHKIVNTFKSKKGSYRMDGHQT | 135 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00136 | 135 | PANTHER | NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED | 3 | 128 | IPR052343 | - | |
| Eupl1g00136 | 135 | Pfam | Reverse transcriptase (RNA-dependent DNA polymerase) | 59 | 126 | IPR000477 | - | |
| Eupl1g00136 | 135 | SUPERFAMILY | DNA-RNA polymerases | 5 | 110 | IPR043502 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00136 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:4485688 | Eupl1g00413 | Eupl-Chr1:17205213 | dispersed | |
| Eupl | Eupl-Chr1:4485688 | Eupl14g01095 | Eupl-Chr14:19971754 | transposed | |
| Eupl | Eupl-Chr1:4485688 | Eupl14g01132 | Eupl-Chr14:22439030 | transposed |