AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00149 ATGGAGAGTTTAGCGCAACTGGAAGCGTTGTGTGAAAGGCTTTACAATTCACAAGACTCAGCTGAAAGAGCTCATGCAGAGAGCACTCTGAAGTGCTTTTCTGTGAACATCGATTACATTTCACAATGTCAATACATTCTGGACAATGCATTGACTCCTTATGCATTGATGTTGGCTAGTTCAAGCTTGTTGAAGCAAGTGACAGAGAACAGCCTCTCTTTGCAGCTCCGGCTTGATATCCGAAACTATCTGATAAACTATCTGGCCACCAGAGGACCTGACTTGCAGCCTTTTGTAACTGGGTCCCTGATTCAACTCTTTTGCCGGGTTACAAAGTTTGGGTGGTTCGATGATGATAGATTCAGAGAGGCGGTTAAAGAGTCAATGAACTTTTTGAGTCAGGCAACATCAAATCATTATGCCATTGGTTTGAAGATATTGAATCAGCTCGTGTCGGAGATGAATCAGCCTAATCCAGGATTGTCTTCAACACATCATCGGAGGGTGGCCTGCTTTTTCAGGGATCAATCACTCTTCCAAATTTTCCAGATCTCTATAACATCACTGTGTCAACTTAAAAATGACGTTGCGAGCAAGTTGCAGGAATTGGCACTTTCTCTTTCACTCAAGTGTTTATCTTTTGATTTTATGGGGACATCTTTGGATGAAAGTTCTGAAGAGTTTGGTACTGTTCAGATTCCATCTTCTTGGAGGCCAGTCCTGGAGGATCCTTCAACACTGCAGATCTTTTTTGATTACTATGCAATCACTAAGTGCCCTCTCTCAAAGGAGGCTTTGGAGTGCTTAGTGCGATTGGCTTCTGTAAGACGTTCTGTGTTCACAAATGATATTGAGCGTTCCAAGTTTCTGGGCCATCTAATGACGGGAACCAAAGAAATTCTACAAACAGGGAAAGGTCTTGCAGATCATGATAATTACCATGAGTATTGTCGTCTTCTTGGACGCTTCAAAGCTAATTATCAGTTGTCAGAGCTTGTGAATGTGGAAGGCTATGGTGATTGGATACGCTTAGTAGCAGAATTCACCTCAAAGTCTTTGCAATCCTGGCAGTGGGCCAGCAGTAGTGTTTACTACCTTTTAGGGCTGTGGTCCAGATTGGTGACATCTGTACCTTATTTGAAGGGTGACACTCCGAGTCTGCTGGATGAATTTGTGCCTAAAATAACTGAAGGTTTTATCACGTCTAGATTTGATTCTGTGCAGGCTGGATTTCCAGATGATCTCTCTGAGAACCCACTAGACAATGTTGAGCTTCTTCAGGATCAGCTCGAGTGCTTTCCTTACATTTGCAGATTCCAGTATGAAAGCAGTAGTCTATATATCATAAAGATTATGGAACCTATTCTGCAATGTTATACGGAAAGATCAAGACTCCAGGCCAGTGGAGATAACAGTGAACTACCTGTGGTTGAAGCAAAACTTGCTTGGATAGTTCATATTATTGCTGCCATTCTTAAGATCAAACAGTGTACTGGCTGTAGTGTGGAATCTCAAGAAATTATTGATGCAGAACTTGCAGCACGTGTTTTGCAGTTAATTAATGTCACTGACAGTGGACTACACACTCAGCGATATGGTGAATTAAGCAAGCAAAGACTTGATCGTGCAATTCTCACTTTCTTTCAACATTTTCGAAAGTCTTATGTAGGTGATCAGGCAATGCACTCCTCGAAGCAGTTATATGCCCGATTATCTGAGCTTCTTGGACTCCATGATCATCTACTACTACTAAACGTCATTGTTGGAAAAATTGCTACAAATCTTAAGTGCTACACGGAGAGTGAGGAGGTTATTGATCACACCTTAAGTCTGTTCTTGGAGATGGTGTCTGGATATATGACTGGGAAGCTGCTTCTGAAGTTGGATACCATCAAATTCATAATTGGGCATCATACTAGGGAACACTTTCCATTTTTAGAAGATTATAGATCCTCTCGCAGCAGAACAACCTTCTACTACACTATTGGCTGGTTGATCTTCTTGGAGGACAGCCCTTTGAAATTTAAATCATCTATGGATCCTCTTTTGCAGGTTTTCATCAGTTTGGAATCAACACCTGATGCTATGTTTCGTACTGATACTGTAAAATATGCTCTGATTGGTTTGATGAGGGATCTAAGAGGAATTACAATGGCAACAACTAGTCGCAGAACATATGGGTTCTTATTTGATTGGCTATACCCTGCTCACATGCCACTTCTCTTAAAAGGCATCTCACATTGGACAGATACTCCAGAGGTTACAACCCCATTGTTAAAATTTATGGCAGAGTTTGTGCTGAACAAAGCTCAACGTCTTACTTTTGATTCATCGTCTCCTAATGGCATACTTCTTTTCCGAGAAGTCAGCAAACTAATTGTTGCTTATGGGTCAAGGATTTTGTCTCTTCCCAATGCTGCTGATATTTATTCCTTCAAATACAAAGGAATATGGATTTGTTTAACTATTCTATCGAGGGCACTTGCTGGAAACTATGTCAACTTTGGTGTGTTTGAACTATATGGTGATAGAGCATTTGCTGATGTGCTTGATATGGCTTTAAAGATGACATTATCAATTCCTTTGGCTGACATACTAGCATTTCGAAAGCTTACAAGGGCTTACTTCGCCTTCTTGGAGGTTCTATTCAACAGTCATGTTGTTATCATTTTGAACCTAGATACAAGCACCTTTATGCATATTGTTGGATCTCTTGAATCTGGCCTTAAAGGTCTGGATACCAATATCTCATCACAGTGTGCATCTGCCGTTGATAGTCTGGCTGCTTTCTATTTCAACAATATTACTGTGGGGGAAGCACTTACATCTCCAGCTACAATGAACCTTGCTAAACACATTGCGGAGTGCCCCAGTTTGTTTCCAGAAATATTAAGGACCCTCTTTGAGATTGTTTTATTTGAGGACTGTGGCAATCAATGGAGTCTTAGCAGACCAATGCTGAGCTTGATACTTGTCAGTGAACAGATATTCACTGATTTGAAAGCTCAAATTTTAGCTTCACAACCAGCAAATCAACAGCAGCGCCTTTCCCTTTGTTTTGACAAATTGATGGCAGATGTTACTCGAAGCTTGGATTCAAAGAACAGAGACAAGTTCACCCAGAACTTGACTATATTCAGGCACGAATTTCGTGTCAAATAG 3162 40.92 MESLAQLEALCERLYNSQDSAERAHAESTLKCFSVNIDYISQCQYILDNALTPYALMLASSSLLKQVTENSLSLQLRLDIRNYLINYLATRGPDLQPFVTGSLIQLFCRVTKFGWFDDDRFREAVKESMNFLSQATSNHYAIGLKILNQLVSEMNQPNPGLSSTHHRRVACFFRDQSLFQIFQISITSLCQLKNDVASKLQELALSLSLKCLSFDFMGTSLDESSEEFGTVQIPSSWRPVLEDPSTLQIFFDYYAITKCPLSKEALECLVRLASVRRSVFTNDIERSKFLGHLMTGTKEILQTGKGLADHDNYHEYCRLLGRFKANYQLSELVNVEGYGDWIRLVAEFTSKSLQSWQWASSSVYYLLGLWSRLVTSVPYLKGDTPSLLDEFVPKITEGFITSRFDSVQAGFPDDLSENPLDNVELLQDQLECFPYICRFQYESSSLYIIKIMEPILQCYTERSRLQASGDNSELPVVEAKLAWIVHIIAAILKIKQCTGCSVESQEIIDAELAARVLQLINVTDSGLHTQRYGELSKQRLDRAILTFFQHFRKSYVGDQAMHSSKQLYARLSELLGLHDHLLLLNVIVGKIATNLKCYTESEEVIDHTLSLFLEMVSGYMTGKLLLKLDTIKFIIGHHTREHFPFLEDYRSSRSRTTFYYTIGWLIFLEDSPLKFKSSMDPLLQVFISLESTPDAMFRTDTVKYALIGLMRDLRGITMATTSRRTYGFLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVLNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRILSLPNAADIYSFKYKGIWICLTILSRALAGNYVNFGVFELYGDRAFADVLDMALKMTLSIPLADILAFRKLTRAYFAFLEVLFNSHVVIILNLDTSTFMHIVGSLESGLKGLDTNISSQCASAVDSLAAFYFNNITVGEALTSPATMNLAKHIAECPSLFPEILRTLFEIVLFEDCGNQWSLSRPMLSLILVSEQIFTDLKAQILASQPANQQQRLSLCFDKLMADVTRSLDSKNRDKFTQNLTIFRHEFRVK 1053
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00149 1053 FunFam ARM repeat superfamily protein 837 1052 - -
Eupl1g00149 1053 PANTHER EXPORTIN 4,7-RELATED 1 1051 IPR044189 GO:0005049(InterPro)|GO:0005049(PANTHER)|GO:0005643(PANTHER)|GO:0005737(PANTHER)|GO:0006611(PANTHER)|GO:0051169(InterPro)
Eupl1g00149 1053 SMART IBN-N-2 26 90 IPR001494 GO:0006886(InterPro)|GO:0031267(InterPro)
Eupl1g00149 1053 Pfam Importin-beta N-terminal domain 26 89 IPR001494 GO:0006886(InterPro)|GO:0031267(InterPro)
Eupl1g00149 1053 Coils Coil 4 24 - -
Eupl1g00149 1053 Gene3D - 836 1052 IPR011989 -
Eupl1g00149 1053 FunFam ARM repeat superfamily protein 1 531 - -
Eupl1g00149 1053 Gene3D - 1 524 IPR011989 -
Eupl1g00149 1053 SUPERFAMILY ARM repeat 1 1041 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00149 K18460 exportin-7
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr1:4862644 Eupl5g00227 Eupl-Chr5:6118051 wgd