Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00152 | ATGGCTTCTTCTGAGAACTTGGCGAGTCTCGAGCAATGGGCGTTCCGTCCGAGCTTCGTTGACCCATGGTTCACCGACGCCTTCGCTCGCGATACCGAAACTCTTACAAAAGCTCTCCAGAAATCTCTCTCCAGCGAATCCGAAACCCTAACCGGTACCAACAGCCCTCAGTTTCTCCACCTCGTCAAGCCCGAACAGGTACCAACCGGCTCGGGTTCGGATCCGGAAACGGCATCGAAACGCCGGAACCCGATCTCCAACGGCAAGATCTCGAAGCGCAAGTCACGAGCGACGAAGCGATCTCCTACCACCTTCATAACGGCTGATCCTTCCAACTTCCGTCAGATGGTGCAGCAGGTAACCGGAATCAGATTCGGTAACTCCCACGTGCCGGTCGCTCCCGTTTTGAAGCCGGAGCCCCAGCGACCGGGTAACCGGTTCCAGAACTGCTGCTTGCCAACGCTGGACACATCAGCCTTCTTGTTGGAAAGCCACAACCCCCACCAGCAGGTGATGGGCCCCATCACAACTCCTCAGGCGCATCTCTCGTTTGCGCCGGTGGCGGAAGGTGGTGCAGGTTTAGATTTCGATACGTTCCAGAGCTTCCCGACTCTGGAGTCGTGGAGAGTAATGTAA | 636 | 56.76 | MASSENLASLEQWAFRPSFVDPWFTDAFARDTETLTKALQKSLSSESETLTGTNSPQFLHLVKPEQVPTGSGSDPETASKRRNPISNGKISKRKSRATKRSPTTFITADPSNFRQMVQQVTGIRFGNSHVPVAPVLKPEPQRPGNRFQNCCLPTLDTSAFLLESHNPHQQVMGPITTPQAHLSFAPVAEGGAGLDFDTFQSFPTLESWRVM | 211 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00152 | 211 | MobiDBLite | consensus disorder prediction | 41 | 60 | - | - | |
| Eupl1g00152 | 211 | MobiDBLite | consensus disorder prediction | 41 | 108 | - | - | |
| Eupl1g00152 | 211 | Pfam | VQ motif | 100 | 123 | IPR008889 | - | |
| Eupl1g00152 | 211 | MobiDBLite | consensus disorder prediction | 70 | 85 | - | - | |
| Eupl1g00152 | 211 | PANTHER | VQ MOTIF-CONTAINING PROTEIN | 5 | 186 | IPR039609 | GO:0005516(PANTHER)|GO:0005634(PANTHER)|GO:0006970(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00152 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:5079237 | Eupl3g01418 | Eupl-Chr3:40254737 | dispersed | |
| Eupl | Eupl-Chr1:5079237 | Eupl13g01697 | Eupl-Chr13:35533872 | transposed |