Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00158 | ATGACTGCTCAGACGCAAGAAGAGATACTAGCTGCTCTTCTCGAACAGCAAAAGATCGATCCTGATGAGCCTATTGTTGAAGATGAAGATGATGATGACGATGACGACGACGACGATGACAAGGATGATGATGAGGCTGAGGGACAACTAGAAGGAGATGCAAATGGTAGATCAAAGCAGAGTAGAAGCGAGAAGAAGAGTCGCAAGGCAATGTTGAAGCTTGGAATGAAACCCATCCCTGGTGTCAGCCGTGTTACTGTCAAGAAGAGCAAGAATATTTTGTTTGTGATCTCAAAACCGGATGTTTTCAAGAGCCCGACATCAGACACGTATGTTGTCTTTGGAGAGGCAAAGATTGAGGACTTGAGCTCGCAACTGCAGACTCAGGCTGCAGAGCAATTCAAGGCTCCTGATCTCAGTCATGTGATCTCCAAGCCTGAATCATCAGCCATGGTTCAGGATGATGAAGATGTCGACGAGACAGGGGTGGAACCAAAGGACATAGATTTGGTGATGACACAGGCCGGAGTCTCAAGATCGAAGGCGGTGACGGCACTCAAGGCCGTTGATGGGGACATAGTTACTGCCATCATGGAGCTAACAAACTAA | 609 | 47.45 | MTAQTQEEILAALLEQQKIDPDEPIVEDEDDDDDDDDDDDKDDDEAEGQLEGDANGRSKQSRSEKKSRKAMLKLGMKPIPGVSRVTVKKSKNILFVISKPDVFKSPTSDTYVVFGEAKIEDLSSQLQTQAAEQFKAPDLSHVISKPESSAMVQDDEDVDETGVEPKDIDLVMTQAGVSRSKAVTALKAVDGDIVTAIMELTN | 202 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00158 | 202 | SMART | NAC-2 | 64 | 120 | IPR002715 | - | |
| Eupl1g00158 | 202 | Gene3D | - | 70 | 123 | IPR038187 | - | |
| Eupl1g00158 | 202 | PANTHER | NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED | 4 | 201 | IPR016641 | GO:0005737(PANTHER)|GO:0005854(InterPro)|GO:0006612(PANTHER)|GO:0051082(PANTHER) | |
| Eupl1g00158 | 202 | CDD | NAC-NACA | 75 | 122 | - | - | |
| Eupl1g00158 | 202 | MobiDBLite | consensus disorder prediction | 57 | 71 | - | - | |
| Eupl1g00158 | 202 | Gene3D | - | 163 | 200 | - | - | |
| Eupl1g00158 | 202 | CDD | UBA-NAC-euk | 165 | 201 | - | - | |
| Eupl1g00158 | 202 | FunFam | Nascent polypeptide-associated complex (NAC), alpha subunit | 71 | 123 | - | - | |
| Eupl1g00158 | 202 | ProSiteProfiles | NAC A-B domain profile. | 61 | 126 | IPR002715 | - | |
| Eupl1g00158 | 202 | Pfam | HYPK UBA domain | 162 | 201 | IPR044034 | - | |
| Eupl1g00158 | 202 | Pfam | NAC domain | 64 | 119 | IPR002715 | - | |
| Eupl1g00158 | 202 | MobiDBLite | consensus disorder prediction | 22 | 49 | - | - | |
| Eupl1g00158 | 202 | MobiDBLite | consensus disorder prediction | 14 | 73 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00158 | K03626 | nascent polypeptide-associated complex subunit alpha |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:586088 | Eupl1g00158 | Eupl-Chr1:5201329 | dispersed | |
| Eupl | Eupl-Chr1:5201329 | Eupl8g00069 | Eupl-Chr8:1649996 | dispersed | |
| Eupl | Eupl-Chr1:5201329 | Eupl5g00252 | Eupl-Chr5:6925994 | wgd |