Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00170 | ATGAAATTCAATAGCTTTAATTGTTACAACTACAACAACAACAAGTTGGGACCGTCGCGTGGTTTGTTGTTAGGTTTTCTTGTGGTTCTGGTCTGTTGTGTGTTCTGCGAAGTTGGGTTTTCCGGAAGCGCCGACGATTTGTTAAAGATGGCTAACCTTCCAGGAGGGATTCGTGATTCTGATGGAGTTCAGAACAGTGCTGAGATCGAAAGTCTCGCCAAATTTGCTGTGGAAGAACACAACAAGAAAGAGAACACGCTACTCGAGTTTGCAAGGGTGGTGAAGGCAAAGGAGCAGGTGGTGAGTGGTACGCTGTACTATCTTACTCTGGAGGTCATCGATGCAGGTGAGAAAAAGATCTACGAAGCAAAGGTCTGGGTGAAGCCATGGATGAACTTCAAGGAGTTGCAGGAATTCAAGCCCGTTGCTGATGCCTCCGCCTCATTTACCCCTTCGGATCTCGGGGCTAAGCAAGGTGATTGA | 483 | 47.2 | MKFNSFNCYNYNNNKLGPSRGLLLGFLVVLVCCVFCEVGFSGSADDLLKMANLPGGIRDSDGVQNSAEIESLAKFAVEEHNKKENTLLEFARVVKAKEQVVSGTLYYLTLEVIDAGEKKIYEAKVWVKPWMNFKELQEFKPVADASASFTPSDLGAKQGD | 160 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00170 | 160 | ProSitePatterns | Cysteine proteases inhibitors signature. | 98 | 111 | IPR018073 | - | |
| Eupl1g00170 | 160 | PANTHER | CYSTATIN FAMILY MEMBER | 29 | 149 | IPR027214 | GO:0004869(InterPro)|GO:0004869(PANTHER) | |
| Eupl1g00170 | 160 | FunFam | Cysteine proteinase inhibitor | 50 | 149 | - | - | |
| Eupl1g00170 | 160 | SUPERFAMILY | Cystatin-monellin | 57 | 144 | IPR046350 | - | |
| Eupl1g00170 | 160 | CDD | CY | 55 | 141 | IPR000010 | GO:0004869(InterPro) | |
| Eupl1g00170 | 160 | Gene3D | - | 50 | 150 | - | - | |
| Eupl1g00170 | 160 | SMART | CY-4 | 52 | 142 | IPR000010 | GO:0004869(InterPro) | |
| Eupl1g00170 | 160 | Pfam | Aspartic acid proteinase inhibitor | 67 | 142 | IPR000010 | GO:0004869(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00170 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:5586690 | Eupl5g00287 | Eupl-Chr5:8615162 | wgd |