AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00183 ATGAGAAACCTGATAATGGACAAGGAGAATGTATTTTCATTCAAGACATCAAAGAGATCACCGTTTTTGCTGCGGGTGGTTCTTGTTTTCTTTGTTATGGCATTTGGTGTGTACATTTGCTCCGTTTGCCTGAAACAGATAACTGTGCAGATAAAACCAACAAACATATTACCTGTCACAGGGAAATCTGAGACACATTGTGATATACGTGGCATCCCACCCGATGAAATCCACCATGTGCATTTTCCTCTGCCAAAAACTTATAGCAGGGGAGAGTGCACGTGTACTCCTGTCCGATTCTTTGTTATTTTATCCATGCAGAGATCTGGAAGTGGGTGGTTTGAGACCTTGCTGAACAGTCACCCCAACATTAGTTCGAATGGGGAAATATTTTCTGTGAAACAAAGGAGAAATGGTACTTCATCCATCCTAGCAACATTAGATACTGTCTATAGCTTAGACTGGATTAGTAGTGCTGCGAAAAATGAATGTGTGGCTGCTGTTGGATTGAAATGGATGCTCAACCAGGCTATTATGATATATCACAGACAAATAGTTAATTATTTCAACTGGAAGGGGGTTTCCGTGATATTTTTGTTCCGAAGGAATCTCTTGCGAAGGCTCATCTCTGTATTGGCAAATCTTTATGACAGAGATGCAAAGCAGCTCAATGGCACACACAAGTCTCATGTGCATACAAAGGAAGAGGCTGAGGTACTCGCACGATTCAAGCCCACGCTAAATATAACTGTCCTAATACCCAACCTTAGTCTTGTTGAGCGCATGATGGCAGATTCATTGAAGCACTTCAATAGCACTCGACATATTATCTTATATTATGAAGATCTCGTAAACAACCATAAGGCATTATCTGATGTTCAAGAGTTTCTTAGAGTTCCGGTAAGGAGATTACAGAGCAGACAAGTAAAGATTCACACGAGACCCCTTTCGGAGCAAATTGAGAATTGGGAGGATGTTTACAAGACATTGAAAGGAACACAGTACGAGCATTTTCTCCACCATACAAATTACATGAGATAG 1041 40.83 MRNLIMDKENVFSFKTSKRSPFLLRVVLVFFVMAFGVYICSVCLKQITVQIKPTNILPVTGKSETHCDIRGIPPDEIHHVHFPLPKTYSRGECTCTPVRFFVILSMQRSGSGWFETLLNSHPNISSNGEIFSVKQRRNGTSSILATLDTVYSLDWISSAAKNECVAAVGLKWMLNQAIMIYHRQIVNYFNWKGVSVIFLFRRNLLRRLISVLANLYDRDAKQLNGTHKSHVHTKEEAEVLARFKPTLNITVLIPNLSLVERMMADSLKHFNSTRHIILYYEDLVNNHKALSDVQEFLRVPVRRLQSRQVKIHTRPLSEQIENWEDVYKTLKGTQYEHFLHHTNYMR 346
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00183 346 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 9 345 IPR052796 -
Eupl1g00183 346 Gene3D - 99 329 IPR027417 -
Eupl1g00183 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 326 IPR027417 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00183 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr13:7844775 Eupl1g00183 Eupl-Chr1:5767061 dispersed
Eupl Eupl-Chr1:5767061 Eupl3g01278 Eupl-Chr3:37855954 transposed