Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl1g00194 | ATGGATTCTCCTCCACCGGCCCACGATAGCTTCACCCAGAAGGAAAAAGAGGGCTCAGCTTCTCCCGTCGATCCTTTCTTGAAGGAGGCTCTCCAGAATCCTCGCCATCGTCTCACCATTCTGCGAATGGAGTTGGATATTCAGAAGTTCATGCAGAACCCTGATCAACAGCAGTTTGAGTTTCCGCATTTCCCTACTTCGTACCTTCGGCTTGCCGCTCACCGTGTTGCTCAACACTATGGGCTGCAGTCTATGGTACTGGATAACATTGTGGATGGCTTGGGAACAAAGATAATAGTCAGAAAAACAATTGAAAGCAGATACCCTACTGTCTGTTTATCGGATGTTCCTACAAAACAGCCGGAAAATGATATACCTGAACAGGTTAAGATTGCCATCAGGCCAAGGCCACACAGATCTTCCTCAAATGATGCGAACGAACTGGGAATCAAACGTAGTTCAGCAAGAACTGTGGAAGAGAGGAAAGAGGAGTATGACAGAGCACGGGCTCGCATCTTCAGTAGCTCCAGCAGTCCCGACTTGGAAGGTTCATCTTCTCAGGCTGCACTCGACGGAAGAAGTTTATGTTTGAGCAGAGATGAGATTGAAGGTTGCAAGAATGCTGTTGATGAGCCAGAGAAGACTCCTATCACCAGGGATGGTAGTACTTCTTCCAGAGTTGCAATTCTTAGAGACAGAGAGAAGGACCGCATTGACCCAGACTATGACCGGAGTTATGAAAGGTATGTTAGGGGCCTCTCTCCTAATCAGAACTTTAGCTTGGGGCCGTTCAACATGCAGAGCTTTCAACCTTCATTCGTGCATTATGAAACTGGTATTCATCAGCTGAGTCAGTTGCCGAGGACCCAATCATCCCTCACTTATAGGCCTTCTTCGAGTCCGATTATGAGTCCTTATTGCGCTGTTGGTATGAATCAGTCATCTGGGGATGCCGTCTATATGCAGTGGCCTAGTCCTGCTATGATGTACGCGCAATCATATGAGCAATTTAGACATGCTATTGTCCAGGCTCCTTTCTATCAGCAACCTCTCAGCTTTGATTACTCGCAAAACCATTAG | 1080 | 47.13 | MDSPPPAHDSFTQKEKEGSASPVDPFLKEALQNPRHRLTILRMELDIQKFMQNPDQQQFEFPHFPTSYLRLAAHRVAQHYGLQSMVLDNIVDGLGTKIIVRKTIESRYPTVCLSDVPTKQPENDIPEQVKIAIRPRPHRSSSNDANELGIKRSSARTVEERKEEYDRARARIFSSSSSPDLEGSSSQAALDGRSLCLSRDEIEGCKNAVDEPEKTPITRDGSTSSRVAILRDREKDRIDPDYDRSYERYVRGLSPNQNFSLGPFNMQSFQPSFVHYETGIHQLSQLPRTQSSLTYRPSSSPIMSPYCAVGMNQSSGDAVYMQWPSPAMMYAQSYEQFRHAIVQAPFYQQPLSFDYSQNH | 359 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl1g00194 | 359 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Eupl1g00194 | 359 | ProSiteProfiles | SUZ domain profile. | 107 | 177 | IPR024771 | - | |
| Eupl1g00194 | 359 | Pfam | R3H domain | 39 | 85 | IPR001374 | GO:0003676(InterPro) | |
| Eupl1g00194 | 359 | PANTHER | CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN | 14 | 349 | IPR051937 | - | |
| Eupl1g00194 | 359 | SMART | R3H-4 | 21 | 103 | IPR001374 | GO:0003676(InterPro) | |
| Eupl1g00194 | 359 | Pfam | SUZ domain | 128 | 176 | IPR024771 | - | |
| Eupl1g00194 | 359 | CDD | R3H-encore-like | 36 | 103 | - | - | |
| Eupl1g00194 | 359 | SUPERFAMILY | R3H domain | 20 | 128 | IPR036867 | GO:0003676(InterPro) | |
| Eupl1g00194 | 359 | ProSiteProfiles | R3H domain profile. | 37 | 106 | IPR001374 | GO:0003676(InterPro) | |
| Eupl1g00194 | 359 | MobiDBLite | consensus disorder prediction | 135 | 162 | - | - | |
| Eupl1g00194 | 359 | Gene3D | - | 10 | 135 | IPR036867 | GO:0003676(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl1g00194 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr1:6164747 | Eupl5g01172 | Eupl-Chr5:33946607 | dispersed |