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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl1g00197 ATGTCAGAAGGTGATATGGCGATAATCAAACCTGAGGTTGTACAAGGCCATTCACCTTTCAAAAAGCTGTTGAATAGTTTTATGAATGAATTCATTATTGCTATTGGAAAAGGGGAACCTGCTGCAGTGATGTCCGAGTATGGCTTTAAAAAAGTTATTTCAATAAATGAGTATGCATCCTTTAAGGCACTAGTCATGATGGAGCAGGAGATTATGGAAGCTATAAATGAACATTCAACTGTTCTTATTTGTGGGGAGACTGGATGTGGTAAAACTACACACAAGTTCCTCAGTTCTTACCACTGCCAAGCGAGTGGGATTTTTGCTAGGTCTTTGTCTAGGGAAGGAAGTTGGGTTTCATGTTAG 366 39.34 MSEGDMAIIKPEVVQGHSPFKKLLNSFMNEFIIAIGKGEPAAVMSEYGFKKVISINEYASFKALVMMEQEIMEAINEHSTVLICGETGCGKTTHKFLSSYHCQASGIFARSLSREGSWVSC 121
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl1g00197 121 Gene3D - 16 80 IPR023214 -
Eupl1g00197 121 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 65 100 IPR027417 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl1g00197 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr1:6243551 Eupl4g01445 Eupl-Chr4:23370221 dispersed