AGRP Logo

AGRP

Asteraceae Genomic Research Platform

AGRP Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00030 ATGAGGAAGCTATTCTCCTTTAGATCTTCTACATCTAGCAATGCAAACAGCAAGCCAGTTCCTCCACCACCAACCGATGAGAAGGTTTATTGGGACATCCCATGGGAAAGTAGAGTTAACAATCAAGTCAGCGACGATGATTTGTTTTCCAAATCTCGAAAACAACTCCTGGAAAGTGAGAACTCTGCTCCAAGTTCAGGTCTTAGAAGGAGCCTCTCATTCTCATCAGCAACCCTTCACAGTGATGGCCTGGGGGAAAGGAATCCCATTTCTTCATGGGATCTGAGTAGATCTCCTTCTACTAGTAGCAGCAATGTTCCGCCTCAGCACTCTGATTATCCGGTTCGCTGCCGTTCCCCTACTCCAGAGAGGCAGTCCAAGGCTAAAAGAGGTGAAGGGGCAGCTACTCAAAAGACATATGGAGTAGAGAAGCTTAATTCTCCCACTTCATCCAGAGGTTACCACAATTCATCAGGGAACTCTTCTTATAGCTCTCCTCCAGTCCTACCACTCAAATGCGGGTCCACTCACTTTAACAATGTCTCGAACAAGATCCTAGACCTCTATATTGATGGAGAACAACAGCAGGACAGGAACTTGAGGCCAAAGAATAGTTCTTCTCAAAGAAACCCCTCCAGTTGCAGAAATGGCGGTGGTTGGCGGCCCCCAAGAATTCAATCTACTGCACCAGCTTCACCAACAGGTAGTAGTAAAGAGAGGCCAAGATCTCATTCATTTAGAGAAGTGACCCACCTTCGCCTTTCAACCAGAGATTGGACGAGAAGCGACTTTGGGTCGGAGTCTCCACAAAAACTTGCAAAAAATGTGGTCGAGAGACTCTCCCAGGTATTACCCCATAAACCCAAAACAAATTCCAGGGGTTTTGATCCCGACACCCCAACCACGGTAGAAGATATTTTTGAGGACTACTTGGACCCACATCCCAGTTCAAATTCAGATGGGGTGATCCAAAAAAGGTGTCTATCAGAAGGCCCTTGCAGAACCATGAATGGATATTGTGAGGAGAATATTTCAGGCTTCCAGAAACAAATCCATTTTCTTGGAGATGTTCCAGTGGAAATGTATTCAGTGCAAACAGAAGGGGATATAGATGTGGAATTACGTAGATTAGCAAAGGAAGCTGAGGAGCGGGTTGTGCTTCTTTCAGAAGAGCTTGAGCAGGATGACCTTCTTCAAGATAGAGGTTTCAGCATACCAGCCCTGCTTCAGACAATTAGAAATCTCACTGGGGAAAGGAAGAGCTTGGCTCTCGAGGTCTCAGCCCAGTTACATTGTCGAATTGCTGAGAGAGCTTCTGCTAAGGAAGCACTTACAATGGCAAAAGTGGAACTGGACTCACGAACAAGGCGACTAGAGAAGGAGAAGAATGAGTTGCAGTCGGGATTGGAGAAGGAGTTGGACAGAAGGTCGAGTGACTGGTCATTCAAGCTCGAGAAATGCCAGTCAGAAGAACAGAGACTACGGGAGCGGGTAAGGGAGCTAGCAGAGCAGAATGTCTCACTTCAGAGAGAAGTCTCCTCCCTTAATGGCAGGGAAGTGGAGAGCAGAGGCAGGATAAGCCGTTCGGAGCTAGAACTGAAGGACCTGATGGCAAGGTTGGAAAAAGCCAGGGAAGAGAATGGGGATCTTCACCAAACCCTGTCTGAGTTGCAAGAGCAGTTTAGAGGGGCAGAAACAGATTGGGATTGCATCCAAAGAAGCTACAAAGAAAAGGAGAAAGAAAACAAGGAGTTCCAGAAAACTGTTACAAGATTACAGAGGACCTGCAGTGAGCAAGAGAAGACAATTGGTGGGTTGCGACAAGGACTTAGCGAGGAAACTGAAAAGAAGCAATGCTCAGAGGAGTTTGATAATCATGTGCGTAAATTGCAAATGGAGCAAGTGAGGTTGACAGGGGTGGAGCAGGTTTTGAGAAGGGAGGTGGAATCTTATAGGATTGAAGTTGAATCCCTTCGGCATGAGAACATTAATCTACTGTACCGCTTACAAGGCAGTGGAAATGAGGGCGGATCTTCATCCTTCAAGCTTGATCGGGAATTGCAGGCCCGGGTTGACTGCTTGCAAAATCAAGGGCTGACATTGTCCAATGAGTGCAGCCAATTATGTGTGACGTTACTGGAAATCATTAAAGGGAAAACTGGCCAAATTCTTGAAATTGTACCAGGCACTGAACATGATCACAAGAACAGATTAGATGGGTATTTTCTAGTGGAATCTGATATGAAAGTCCAGAGTTTGAAGAGGGGAATTGAAAATCTGACAAGAAGTTTGCAGACAATATCTTCAGTGTTGCATGAGAAGTGCAACCAAGTTGCTTTAGAATCTCGGTCACATTTCTCAGAGGGTAGCGGATTAGGGAGACTAAACCGTGAAGCCTCAGAGGATGATATGGGATTTGAGCTCAAGGCAGAAACGCTACTTACAACTGTATTGCGTGAAAAGATGTTCTTCAAACAGCAGGAAGTTGAGCAATTGCAAGCTGAGTTGGCAACGGCAGTAAGGGGTCACGACATCCTCAGATGTGAAGTCCAGACTGCACTAGATGCCCTTTCCTGCATGTCCCACAAGATGAAGGATCTTGAACTTCAGATGTTGAGGAAGGATGAGGCCATAAGTAACCTTAGAAGTGACCTGCAAGAATGTACAAAGGAATTGACGATCACAAAGGGGATACTGCCAAAAGTTTCTGAAGAGAGAGATCTGATGTGGGAGGAGGTGAAGCAGTACAGTGAGAAGAACATGTTACTGAACTCTGAGGTAAACTTGTTGAAGAAGAAGATAGACGCTCTCGATGAAGATATACTTCTCAAAGAAGGTCAAATCACAATCCTAAAGGACAGTCTTGGCAATAAACCCTTTGACATACTCTACAGTCCCAAGTCCTTGCATGAATTCAGACTGGAATGA 2928 45.56 MRKLFSFRSSTSSNANSKPVPPPPTDEKVYWDIPWESRVNNQVSDDDLFSKSRKQLLESENSAPSSGLRRSLSFSSATLHSDGLGERNPISSWDLSRSPSTSSSNVPPQHSDYPVRCRSPTPERQSKAKRGEGAATQKTYGVEKLNSPTSSRGYHNSSGNSSYSSPPVLPLKCGSTHFNNVSNKILDLYIDGEQQQDRNLRPKNSSSQRNPSSCRNGGGWRPPRIQSTAPASPTGSSKERPRSHSFREVTHLRLSTRDWTRSDFGSESPQKLAKNVVERLSQVLPHKPKTNSRGFDPDTPTTVEDIFEDYLDPHPSSNSDGVIQKRCLSEGPCRTMNGYCEENISGFQKQIHFLGDVPVEMYSVQTEGDIDVELRRLAKEAEERVVLLSEELEQDDLLQDRGFSIPALLQTIRNLTGERKSLALEVSAQLHCRIAERASAKEALTMAKVELDSRTRRLEKEKNELQSGLEKELDRRSSDWSFKLEKCQSEEQRLRERVRELAEQNVSLQREVSSLNGREVESRGRISRSELELKDLMARLEKAREENGDLHQTLSELQEQFRGAETDWDCIQRSYKEKEKENKEFQKTVTRLQRTCSEQEKTIGGLRQGLSEETEKKQCSEEFDNHVRKLQMEQVRLTGVEQVLRREVESYRIEVESLRHENINLLYRLQGSGNEGGSSSFKLDRELQARVDCLQNQGLTLSNECSQLCVTLLEIIKGKTGQILEIVPGTEHDHKNRLDGYFLVESDMKVQSLKRGIENLTRSLQTISSVLHEKCNQVALESRSHFSEGSGLGRLNREASEDDMGFELKAETLLTTVLREKMFFKQQEVEQLQAELATAVRGHDILRCEVQTALDALSCMSHKMKDLELQMLRKDEAISNLRSDLQECTKELTITKGILPKVSEERDLMWEEVKQYSEKNMLLNSEVNLLKKKIDALDEDILLKEGQITILKDSLGNKPFDILYSPKSLHEFRLE 975
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00030 975 MobiDBLite consensus disorder prediction 199 215 - -
Eupl5g00030 975 Coils Coil 641 661 - -
Eupl5g00030 975 MobiDBLite consensus disorder prediction 91 110 - -
Eupl5g00030 975 MobiDBLite consensus disorder prediction 194 249 - -
Eupl5g00030 975 MobiDBLite consensus disorder prediction 1 16 - -
Eupl5g00030 975 MobiDBLite consensus disorder prediction 79 165 - -
Eupl5g00030 975 MobiDBLite consensus disorder prediction 140 165 - -
Eupl5g00030 975 MobiDBLite consensus disorder prediction 1 31 - -
Eupl5g00030 975 Coils Coil 444 475 - -
Eupl5g00030 975 Coils Coil 864 884 - -
Eupl5g00030 975 Coils Coil 378 398 - -
Eupl5g00030 975 Coils Coil 526 560 - -
Eupl5g00030 975 Coils Coil 913 940 - -
Eupl5g00030 975 Coils Coil 484 518 - -
Eupl5g00030 975 Coils Coil 575 602 - -
Eupl5g00030 975 PANTHER CAP-GLY DOMAIN LINKER 1 970 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00030 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr1:739530 Eupl5g00030 Eupl-Chr5:592829 wgd