AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00062 ATGGAGATTGGAATCTATTTAAGGAAAGGCGTGGTTTTTTCTGTCAGAACTTGTTATAGATCGGGTCGTGATCATCCTTTCGTTTTGGGTATTGTGTTTTTCTTCCTTCTTCTTCATAGATTTCTTCCTCGTGTGTTTGGCTTCTTGGTCTCTTCTGCCCCTGTTGTTGTTTGTACCGCTGTTCTTCTTGGAGCCCTTTTGATTTATGGGCATCCCAATATCCCCGAAGTCGAAGAAGAAGAGGAGGAGAAGAGATGGAGGGGGACACACCATGAAATCTCTTCTCTCAAAGCTTCTGGGGTTGTTGAAGGTGACCTTGTTGTTGAGAAAGATGAGAGTTTTTCTGTAGAAACCCATAAGGGGAAGAGAAGAGATAAAGAAGAGAAGAATGTAGAAGATGAGATAGATGTGGTCCTCTCAGCAACCCATGATGATGATTTGATTGGTGGTGGGGCTGTTGTGATCGACGAAGAACCTAAGGGAATTCATCGCGAGAAGCAAGTGATCGAAGAGGAGAGAGAATTGCATTATCAGGGATTTATCGAGAAGATAGAATTCCATGAAGAGAAACTACTGATCGAAGAAGGTGTATCTGATTCTTGCAATGACTACGTTGAAATTCAATCCTTCGAGGGTTGGAATTCTTCTCACGATTTTTTATCTTGGCAACAAATAGAAGATCATGATGAGTCTTCTGACTCTGATTCTGATCATGCAGAGAGTTCCTCTCCAGATGCTTCCGTGGCCGACATCATTCCAATGCTAGATGAGCTCCATCCACTCTTAGAAGCTCAACCTCCTCAGCCTGCTCTTATATCCCTTGGTGATTCTCATTCTGCATCAGAACATTCTCATAGATCCAATGGTGGCAGTATTGAGTCAGAGGAGGAGGCTGAAAATCACGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGATGAAGGGAAACAGGGGGCCCAGGACAATGGAATTAAAACCGTAGTCACATGGACAGAGGATGATGAGAAGAATCTCGTGGATCTTGGGAATTCTGAGCTGGAAAGGAACCAGCGGTTGGAGAATTTAATCACGAGGCGAAGAGCGAGGAAAAACTTCAGAATGATGGTACCTGAGAAGAATCTGATAGACTTGGACAGTAATGACCCTCCATTTCAAATTGCTCCCATATCAACGGCAAGGCATAATCCATTTGATCTTCACTATGATTCCAATGAGGCCATGGGATTACCACCCATTCCTGGTTCAGCTCCTTCAGTTTTGTTACCAAGACGAAACCCTTTTGATCTTCCTTACGAACCATTTGAAGAAAGACCCAATCTCATGGGAGACAGCTTTCACGAAGAGTTTGTAACAGTTCACCAGAAGGATATGTACTTCCGAAGGCACGAGAGCTTTAGTCTGGGAACTTCTTTCTTGGGAGCACGCAAGCAAGAGAAGCACGATACTTTGTTCAGACCCTACTTTGTTACTGAACGGATGACATCAGAGGGGGTCGAATATCCCACATTTCAACGACAATTGAGTGGGAGGAGTGATTCTAAGGTGAGTTCCGCTCCTGAGACAGATTCACTTTCTTCAATTGCAGAACAGGAAGATCACAGTCTCATTGAACAAGAATTGTCTCAAGAAGGTGAACCGATCTCTTATTTTGACCATGCACCTGATCATGAACAAGAAAGCCAATCCTCTGAAGAAGTTGACTTGGTGGAAAAGAGAGACGCTGAACTCAGTGGGGTTGAGAACAATGGGGCAGATGAAGAAAATGCCTATGAAACAGAATCAAGTTTGCACTATGCTGAATCCATATCTTTGACTGTGGGACCCAGCACAAGTGATGTTTGCATGAAACCAGAAGCAGTCGAAGAGATGTACACTGGTTCAAGCTCCTCCTCATCGTCTGAAGTGAATGAAAGATTGGGAAATCTGGAGCTAACAAGAGTTGAGAGCACCGAGGGATCCAGCAATTCCATGCAACCATCTATCGCAGATTCCGATCTTAAGAACATGATCTTGGAAGGAGTGGAGGACAGTCAAACGAAGGAACCTGTTTATGATTCAAGCCCATCGGCAGTCAGGAGGACCCTTTCTAACATGGTAACCATTGAAGAAGCTTTAGGTTGCATGGATAAAGGGGTTCTCAACTCTACTTACTCCATAGCGTCTGACATGCGGGTAGAGATATCAGAAGAGGGTTCAACTCCAGTGCTGGTGGAAAGAGCCATTTCAGTTGAAGACTATGTCCAGCGTAATGGGAGCATAGAAAAGGAGATGGCCTCTGGCAATGAAGGGCTATGGGCAGCCCCATCACACCTATGTGCAGTAGACGAGAATGAATTGAGGTCAAGGGAAGTAACTGAGATCAGTGAGCAAGATGTTATAGAAGTTGGATTTTCGGGAGTTAACCAGAATTCTGATGATCCCATTGCACCGATGGTGCCGTCAGTGGTTGATCAAGTTTTCATCAACTTGAGTTCATCTTCATCACAGACTGAATCAGAAGAGGAGGTTCCAATGGGTGAGGAACCAAATCTTCCGTTTGAACAGGATCAAGTCCATTTTTTGAGTTTCAGACCAGAGATCTATGTCGGGGTCCACCAGTTTGATGTGGATGAGAAGGTGGACATCATGGCTTCTAGTTATTCAGATGGTTTGTCATCTGAAGATTTAACTTCTTCTGTGTCAGAAAAACCACTGCCTTTGATGGAGAAATCGACATTTCAGCCGTCATCTGATGCTGATCGTGAAGAATCCCAGGAACCATCTATTCTTCTGGGGACGTCTGATTTTTCAAATTTGTCTCCCTTAATTTCCGTTCCCACTTCTATCCAGTCTGAATTTTCAGAGAATAATCGCACTACAGATCAAATAGATTTCGAAGACGATTTTCATGATGGAATCCAAAGTGATAAGAAAGGTCGAGTCTTTGATCACTTAAATGGTTCACGGCAAGCAATTAGACTCCGTGTCACTGAGGAAGAATTCGATGAGGAGACCGAGGGAATCAAAGGTATTGATGAAAGATTTCTGACAGAACTGGAAGCAGTCGGCGACTTCAGTGTCAAAGAATTGGGGGTCAACAAAAACCAAATAGAAAAGCAATTGGCAGTAAAGGTGGAAGAAAGCCTTCTGGGGATAGTTCTTGAAGCCAAGTCTACTGAAGATCATGAAGGCAATTCCAAAAAATTGATCCAACCTGAGGCTGCTGTAGACGCACCGAAACTTATGGAATCTGGGCTCAAGTCTGCCGATGTTGAAGTGGGTGATAGATATTCGGAGATGATGGAGAGTACAGAATTGCATATTCTTGAAGCTAGCTCTATCAAAGATATCGATTCTGCTTTTAAGCAACTCCGTGAAGGAGAAGTTGAGAAATCTAGAATTCTTGAATCAATCCATGACAAACCATTCTTGAAGGAAACTGAAGATGGGTCTGCTGAGTTCAAGCTACCCAACCAAGATCCAAATCCAATGGAAACCAATTTGGAGCTGCTACTTCTCGAAGCAAGATCTCTCGCAGATATTGATTTAGCCTTTAAGCACATCCATGAGGGAGAAGTTGAGAAGCCTATTGTTCTGGAATTGATCAACGGCGAGCCAATATTGGAGGAAAGTAAAGTTGTGCCTGCAGAGTTTGAGCTACCCAGCCAAGCTCCAAATCCAATAGAGACTGGTTTGGAGCTGCCAGTTCTTGAAGATGTTGATTTAGCTTTTAAGCAACTCCATGAGAGAGAAGGTGAGAAGCCTATTGTTCTTGAATCAATCCACGAGTCAATATTGGAGGAAACTCAAGTTGGGTCTGCTGATTTCGATCTACCCAGTCAAGATCCAAATCCAATAGAGACCAATTTGGAGGTGCCAGGTCTTGAAGCAAGATCTCTCAAAGATATTGATTTACCTTTTAAGCCACTCCGTCAGGAAGAAGTTGAGAAGTCTATTGTTCTTGAATCAATCTGCGACGGCGATACTAAAGTTGGGTCTGTTGAACTTGGTCTACCAGACAGAGATCCAAATCCGGGTGACACTGATTTGGAGCTCCCAGTTATTGAAGCAAGGTCTCTCCAAGCAGGTGATCATGAGAAGCCTGCCCTTCCTAAATCAGTTGATGACAATCCTCAAGTGCTGGAACCCCAAGATTCAGTAGAGATTCATTCAGATTTGCAAGTTCTTGAGGTAAGATATGTAGGAGAACCTCATTTGGCTCCAAAGCAACTCTCAGAAGGAAATTTGGAGAATCTACCTAGACCATTTGAATCTGATGCTGGGTCAGTTGGAGTTCGAGCAAAGGAAGTGGAATTGGTCAAAGAGATCGAATCAGGTTTTGAAGAATCCTTTACTATTGAAGAATCAAACCTTTTGGTCAAAGAAACACACGGGGGTTCAAGCTTGATCACATTAGGTGCAAGAAAGAAGAAAGCAGGATCAGATAAATCGAGCTCAAGCTCAAGCTCAAGCTCGAGCTCGAGCTCAAGTGATTCTGATTGA 4491 43.44 MEIGIYLRKGVVFSVRTCYRSGRDHPFVLGIVFFFLLLHRFLPRVFGFLVSSAPVVVCTAVLLGALLIYGHPNIPEVEEEEEEKRWRGTHHEISSLKASGVVEGDLVVEKDESFSVETHKGKRRDKEEKNVEDEIDVVLSATHDDDLIGGGAVVIDEEPKGIHREKQVIEEERELHYQGFIEKIEFHEEKLLIEEGVSDSCNDYVEIQSFEGWNSSHDFLSWQQIEDHDESSDSDSDHAESSSPDASVADIIPMLDELHPLLEAQPPQPALISLGDSHSASEHSHRSNGGSIESEEEAENHEEEEEEEDDDDDDDDEGKQGAQDNGIKTVVTWTEDDEKNLVDLGNSELERNQRLENLITRRRARKNFRMMVPEKNLIDLDSNDPPFQIAPISTARHNPFDLHYDSNEAMGLPPIPGSAPSVLLPRRNPFDLPYEPFEERPNLMGDSFHEEFVTVHQKDMYFRRHESFSLGTSFLGARKQEKHDTLFRPYFVTERMTSEGVEYPTFQRQLSGRSDSKVSSAPETDSLSSIAEQEDHSLIEQELSQEGEPISYFDHAPDHEQESQSSEEVDLVEKRDAELSGVENNGADEENAYETESSLHYAESISLTVGPSTSDVCMKPEAVEEMYTGSSSSSSSEVNERLGNLELTRVESTEGSSNSMQPSIADSDLKNMILEGVEDSQTKEPVYDSSPSAVRRTLSNMVTIEEALGCMDKGVLNSTYSIASDMRVEISEEGSTPVLVERAISVEDYVQRNGSIEKEMASGNEGLWAAPSHLCAVDENELRSREVTEISEQDVIEVGFSGVNQNSDDPIAPMVPSVVDQVFINLSSSSSQTESEEEVPMGEEPNLPFEQDQVHFLSFRPEIYVGVHQFDVDEKVDIMASSYSDGLSSEDLTSSVSEKPLPLMEKSTFQPSSDADREESQEPSILLGTSDFSNLSPLISVPTSIQSEFSENNRTTDQIDFEDDFHDGIQSDKKGRVFDHLNGSRQAIRLRVTEEEFDEETEGIKGIDERFLTELEAVGDFSVKELGVNKNQIEKQLAVKVEESLLGIVLEAKSTEDHEGNSKKLIQPEAAVDAPKLMESGLKSADVEVGDRYSEMMESTELHILEASSIKDIDSAFKQLREGEVEKSRILESIHDKPFLKETEDGSAEFKLPNQDPNPMETNLELLLLEARSLADIDLAFKHIHEGEVEKPIVLELINGEPILEESKVVPAEFELPSQAPNPIETGLELPVLEDVDLAFKQLHEREGEKPIVLESIHESILEETQVGSADFDLPSQDPNPIETNLEVPGLEARSLKDIDLPFKPLRQEEVEKSIVLESICDGDTKVGSVELGLPDRDPNPGDTDLELPVIEARSLQAGDHEKPALPKSVDDNPQVLEPQDSVEIHSDLQVLEVRYVGEPHLAPKQLSEGNLENLPRPFESDAGSVGVRAKEVELVKEIESGFEESFTIEESNLLVKETHGGSSLITLGARKKKAGSDKSSSSSSSSSSSSSSDSD 1496
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00062 1496 Coils Coil 291 311 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 551 598 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 1479 1496 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 503 533 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 296 319 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 226 245 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 226 240 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 884 929 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 268 332 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 1465 1496 - -
Eupl5g00062 1496 PANTHER CARDIOMYOPATHY-ASSOCIATED PROTEIN 1 1495 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 279 295 - -
Eupl5g00062 1496 MobiDBLite consensus disorder prediction 552 582 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00062 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2212482 Eupl Eupl5g02039 Eupl-Chr5:46301282 Eupl5g00062 Eupl-Chr5:1324215
2214719 Eupl Eupl1g00034 Eupl-Chr1:1180497 Eupl5g00062 Eupl-Chr5:1324215