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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00074 ATGAACAAGCCATCCACTTCAGAAATCCCAAGGGAGAGAGAGGGAGAGAGGAGCAGAATAATGGATTCCGGTGTTGCTATGGTTGCACTGCTGTTTCTCATGGCATTTCCCGGCGTGTCACCAGAAGCCCCAGCGCCATCACCGGACTGCTTTTCAAGCCTAGTGAATTTGTCGGATTGTCTGACGTATGTCATGGCCGGAAGCAACCTGACGACCCCAGAAAAGGGATGCTGTCCTGCCCTTGCCGGTCTCGTCGCCACTTCTCCCATCTGCCTCTGTCACCTTCTTGACAACTCCACTACCTTCGGCGTTCAACTCAACATCGACAAGGCCCAAAATCTTCCTAAGGTTTGCACTGTCAGTACACCGCCCCTCAGCTTGTGCGCAGCCTATGGAGACTCAGTTGGTGCTCCGGAAGCAAGCAAGGGCCCAATTGCACCTGATTCGGTACCACCATCAGCGGGAGAAAGCAATGGTGCTTCGAGAAGCATTATAGACTATGCTCTGGTCTTCCTGATTGGCTTATCAAGCGCTGCTGTTGCCATCTTTCTCGGAGATTCTTGA 564 52.66 MNKPSTSEIPREREGERSRIMDSGVAMVALLFLMAFPGVSPEAPAPSPDCFSSLVNLSDCLTYVMAGSNLTTPEKGCCPALAGLVATSPICLCHLLDNSTTFGVQLNIDKAQNLPKVCTVSTPPLSLCAAYGDSVGAPEASKGPIAPDSVPPSAGESNGASRSIIDYALVFLIGLSSAAVAIFLGDS 187
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00074 187 Pfam Probable lipid transfer 41 128 IPR016140 -
Eupl5g00074 187 CDD AAI-LTSS 57 118 - -
Eupl5g00074 187 PANTHER BIFUNCTIONAL INHIBITOR-LIPID-TRANSFER PROTEIN-SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 42 157 IPR043325 -
Eupl5g00074 187 SUPERFAMILY Bifunctional inhibitor-lipid-transfer protein-seed storage 2S albumin 49 128 IPR036312 -
Eupl5g00074 187 Gene3D - 47 126 IPR036312 -
Eupl5g00074 187 FunFam Bifunctional inhibitor-lipid-transfer protein-seed storage 2S albumin superfamily protein 47 127 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00074 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2214723 Eupl Eupl1g00038 Eupl-Chr1:1318267 Eupl5g00074 Eupl-Chr5:1548485
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Eupl11g00435 . 8 156 Lipid Metabolism gene family AT3G01570 54.667 4.47e-48 151.0
Eupl11g00314 . 1 318 Lipid Metabolism gene family AT1G67730 65.0 4.50e-166 463.0
Eupl11g01269 . 7 269 Lipid Metabolism gene family AT3G02580 79.468 1.17e-164 456.0
Eupl11g00131 . 52 260 Lipid Metabolism gene family AT4G22750 28.761 7.05e-19 85.1
Eupl11g00038 . 51 262 Lipid Metabolism gene family AT4G22750 29.741 1.09e-15 75.5
Eupl11g01235 . 48 341 Lipid Metabolism gene family AT3G02600 70.0 3.05e-160 451.0
Eupl11g00837 . 104 159 Lipid Metabolism gene family AT4G22750 41.071 7.49e-09 55.8
Eupl11g00744 . 23 371 Lipid Metabolism gene family AT1G76340 80.229 0.0 556.0
Eupl11g00682 . 3 1081 Lipid Metabolism gene family AT1G74720 66.758 0.0 1459.0
Eupl11g00586 . 13 987 Lipid Metabolism gene family AT3G01380 71.269 0.0 1425.0
Eupl2g01120 . 202 341 Lipid Metabolism gene family AT5G12970 30.137 2.10e-08 55.8
Eupl1g00038 . 20 191 Lipid Metabolism gene family AT3G43720 42.458 3.15e-29 105.0
Eupl7g00960 . 22 183 Lipid Metabolism gene family AT2G48140 49.112 1.12e-41 138.0
Eupl7g00961 . 3 161 Lipid Metabolism gene family AT3G22600 61.111 4.68e-61 185.0
Eupl14g00972 . 50 122 Lipid Metabolism gene family AT5G64080 45.333 9.86e-13 57.8
Eupl6g00910 . 9 331 Lipid Metabolism gene family AT4G04930 82.043 0.0 566.0
Eupl7g01013 . 22 153 Lipid Metabolism gene family AT2G48140 57.664 1.07e-41 137.0
Eupl7g01014 . 3 161 Lipid Metabolism gene family AT3G22600 61.111 6.02e-61 184.0
Eupl4g00038 . 1 227 Lipid Metabolism gene family AT1G68000 75.771 5.57e-129 361.0
Eupl4g00069 . 52 262 Lipid Metabolism gene family AT4G22750 28.959 2.67e-16 77.4
Eupl4g01499 . 14 166 Lipid Metabolism gene family AT3G18570 52.229 5.18e-44 141.0
Eupl4g01536 . 1 684 Lipid Metabolism gene family AT1G73920 70.622 0.0 972.0
Eupl4g01599 . 41 326 Lipid Metabolism gene family AT3G57880 28.477 1.55e-16 82.4
Eupl3g01342 . 54 154 Lipid Metabolism gene family AT4G22750 29.825 3.43e-10 59.3
Eupl9g00265 . 15 137 Lipid Metabolism gene family AT2G25890 61.538 7.20e-43 137.0
Eupl3g00619 . 3 1121 Lipid Metabolism gene family AT5G64070 66.898 0.0 1491.0
Eupl3g00788 . 1 237 Lipid Metabolism gene family AT2G34770 74.684 4.40e-138 385.0
Eupl3g00789 . 1 232 Lipid Metabolism gene family AT2G34770 76.293 7.49e-138 384.0
Eupl5g00872 . 1 157 Lipid Metabolism gene family AT3G03680 75.159 2.10e-74 240.0
Eupl5g00873 . 280 1017 Lipid Metabolism gene family AT3G03680 76.653 0.0 1204.0
Eupl8g00601 . 3 1011 Lipid Metabolism gene family AT4G11610 71.386 0.0 1533.0
Eupl2g00436 . 1 419 Lipid Metabolism gene family AT1G62430 77.566 0.0 689.0
Eupl2g00613 . 296 417 Lipid Metabolism gene family AT1G22610 37.097 1.19e-14 77.0
Eupl4g02120 . 117 230 Lipid Metabolism gene family AT4G22750 35.156 2.93e-13 67.8
Eupl8g01035 . 255 428 Lipid Metabolism gene family AT2G44520 62.632 1.42e-76 234.0
Eupl8g01037 . 103 428 Lipid Metabolism gene family AT2G44520 67.836 1.55e-164 465.0
Eupl1g01509 . 15 270 Lipid Metabolism gene family AT5G60510 46.931 1.15e-87 261.0
Eupl1g01625 . 104 296 Lipid Metabolism gene family AT2G39290 78.061 2.96e-108 311.0
Eupl1g01472 . 28 270 Lipid Metabolism gene family AT4G22750 33.984 2.77e-36 129.0
Eupl13g01669 . 31 150 Lipid Metabolism gene family AT5G64080 55.833 2.53e-40 135.0
Eupl13g01529 . 54 260 Lipid Metabolism gene family AT4G22750 31.004 2.68e-16 77.4
Eupl3g01887 . 40 101 Lipid Metabolism gene family AT5G64080 58.462 5.29e-16 70.9
Eupl6g00486 . 29 260 Lipid Metabolism gene family AT4G22750 27.5 3.26e-19 85.9
Eupl1g00132 . 41 297 Lipid Metabolism gene family AT4G22750 28.72 3.90e-18 82.4
Eupl5g00074 . 30 132 Lipid Metabolism gene family AT3G43720 47.573 4.14e-24 92.0
Eupl4g01186 . 104 159 Lipid Metabolism gene family AT4G22750 41.071 2.26e-09 57.4
Eupl4g01053 . 3 370 Lipid Metabolism gene family AT1G76340 78.4 0.0 574.0
Eupl4g00548 . 293 436 Lipid Metabolism gene family AT1G22610 30.263 1.61e-11 66.6
Eupl4g00447 . 1 318 Lipid Metabolism gene family AT1G67730 66.562 6.09e-170 473.0
Eupl4g00446 . 13 306 Lipid Metabolism gene family AT1G67730 59.868 1.31e-136 388.0
Eupl4g00202 . 52 286 Lipid Metabolism gene family AT4G22750 26.984 1.09e-18 84.7
Eupl6g01398 . 18 200 Lipid Metabolism gene family AT1G67730 28.351 1.46e-07 50.4
Eupl6g01349 . 202 349 Lipid Metabolism gene family AT5G12970 30.519 7.16e-09 57.4
Eupl10g00079 . 17 576 Lipid Metabolism gene family AT5G57800 67.5 0.0 788.0
Eupl6g00332 . 1 419 Lipid Metabolism gene family AT1G62430 79.714 0.0 712.0
Eupl6g00161 . 296 429 Lipid Metabolism gene family AT1G22610 38.235 8.93e-17 84.0
Eupl4g01668 . 48 338 Lipid Metabolism gene family AT3G02600 69.759 1.64e-156 441.0
Eupl12g00097 . 13 365 Lipid Metabolism gene family AT2G33630 29.891 1.97e-30 123.0
Eupl9g00631 . 15 380 Lipid Metabolism gene family AT2G33630 32.718 1.91e-50 179.0
Eupl1g00712 . 1 1049 Lipid Metabolism gene family AT5G17980 64.492 0.0 1387.0
Eupl1g01061 . 1 433 Lipid Metabolism gene family AT5G05580 69.515 0.0 632.0
Eupl1g01089 . 30 262 Lipid Metabolism gene family AT5G60510 31.25 8.98e-31 115.0
Eupl1g01126 . 1 303 Lipid Metabolism gene family AT2G34980 73.684 1.35e-138 392.0
Eupl8g00430 . 6 449 Lipid Metabolism gene family AT2G46210 64.865 0.0 631.0
Eupl9g01150 . 1 627 Lipid Metabolism gene family AT5G57800 65.391 0.0 874.0
Eupl14g00777 . 1 297 Lipid Metabolism gene family AT4G22750 65.246 6.64e-133 378.0
Eupl14g00902 . 50 430 Lipid Metabolism gene family AT2G45150 69.62 0.0 543.0
Eupl14g00764 . 1 298 Lipid Metabolism gene family AT4G12110 70.805 6.89e-165 458.0
Eupl14g00769 . 1 607 Lipid Metabolism gene family AT2G37700 56.09 0.0 698.0
Eupl10g00985 . 13 137 Lipid Metabolism gene family AT2G25890 60.606 1.21e-43 139.0
Eupl10g00679 . 1 340 Lipid Metabolism gene family AT5G19980 71.591 1.24e-175 489.0
Eupl13g00045 . 244 498 Lipid Metabolism gene family AT3G61300 30.216 6.16e-14 73.2
Eupl13g00509 . 74 396 Lipid Metabolism gene family AT3G01380 25.225 4.26e-14 75.1
Eupl13g00780 . 9 270 Lipid Metabolism gene family AT5G60510 46.209 1.65e-87 260.0
Eupl13g00811 . 117 158 Lipid Metabolism gene family AT4G22750 45.238 3.38e-07 50.8
Eupl2g01396 . 103 237 Lipid Metabolism gene family AT4G22750 25.517 6.44e-08 53.1
Eupl2g01381 . 81 396 Lipid Metabolism gene family AT3G01380 23.724 8.51e-11 64.3
Eupl10g01144 . 42 516 Lipid Metabolism gene family AT2G19450 67.629 0.0 672.0
Eupl10g01054 . 1 139 Lipid Metabolism gene family AT4G29460 48.936 6.44e-47 148.0
Eupl14g00907 . 50 318 Lipid Metabolism gene family AT2G45150 64.664 3.11e-123 358.0
Eupl9g01412 . 41 298 Lipid Metabolism gene family AT1G51570 27.972 2.40e-11 64.7
Eupl9g00479 . 42 516 Lipid Metabolism gene family AT2G19450 67.355 0.0 674.0
Eupl14g00293 . 4 449 Lipid Metabolism gene family AT3G61580 65.695 0.0 625.0
Eupl14g00464 . 3 1011 Lipid Metabolism gene family AT4G11610 69.396 0.0 1487.0
Eupl14g00072 . 1 293 Lipid Metabolism gene family AT4G22750 56.863 5.34e-108 314.0
Eupl1g00353 . 6 843 Lipid Metabolism gene family AT5G48060 63.288 0.0 1125.0
Eupl1g00349 . 1 773 Lipid Metabolism gene family AT3G57880 86.34 0.0 1419.0
Eupl7g00956 . 22 183 Lipid Metabolism gene family AT2G48140 51.724 4.61e-44 144.0
Eupl7g00957 . 3 106 Lipid Metabolism gene family AT3G22600 69.231 2.62e-46 146.0
Eupl5g01434 . 103 296 Lipid Metabolism gene family AT2G39290 81.218 1.88e-110 322.0
Eupl6g01704 . 130 160 Lipid Metabolism gene family AT2G19450 67.647 3.31e-06 42.4
Eupl5g00369 . 1 773 Lipid Metabolism gene family AT3G57880 85.032 0.0 1389.0
Eupl5g00386 . 1 383 Lipid Metabolism gene family AT3G12120 75.457 0.0 622.0
Eupl7g00613 . 9 1012 Lipid Metabolism gene family AT1G04150 64.752 0.0 1303.0
Eupl7g00632 . 1 606 Lipid Metabolism gene family AT2G37700 51.447 0.0 624.0
Eupl5g00425 . 7 794 Lipid Metabolism gene family AT5G06850 76.553 0.0 1318.0
Eupl5g01906 . 50 261 Lipid Metabolism gene family AT1G07420 88.679 1.06e-143 400.0
Eupl5g02131 . 1 433 Lipid Metabolism gene family AT5G05580 71.523 0.0 676.0
Eupl5g01864 . 66 259 Lipid Metabolism gene family AT4G22750 38.095 2.72e-29 112.0
Eupl14g01097 . 39 156 Lipid Metabolism gene family AT4G25140 75.424 2.21e-52 167.0
Eupl8g00729 . 247 376 Lipid Metabolism gene family AT3G61300 29.851 5.09e-07 46.2
Eupl3g00230 . 1 307 Lipid Metabolism gene family AT1G22610 49.201 4.84e-73 240.0
Eupl3g00153 . 55 245 Lipid Metabolism gene family AT1G67730 30.256 1.44e-13 68.6
Eupl10g00453 . 41 288 Lipid Metabolism gene family AT3G57880 28.897 2.45e-13 70.9
Eupl10g00391 . 41 288 Lipid Metabolism gene family AT3G57880 28.897 2.45e-13 70.9
Eupl3g02345 . 118 291 Lipid Metabolism gene family AT4G22750 27.957 5.67e-11 60.8
Eupl3g02220 . 247 498 Lipid Metabolism gene family AT3G61300 29.603 1.39e-13 72.0
Eupl3g02499 . 1 477 Lipid Metabolism gene family AT2G33630 72.594 0.0 746.0
Eupl9g00877 . 21 100 Lipid Metabolism gene family AT4G29470 42.169 5.97e-18 75.1
Eupl2g01370 . 81 396 Lipid Metabolism gene family AT3G01380 23.423 4.25e-10 62.0
Eupl14g00008 . 50 122 Lipid Metabolism gene family AT5G64080 45.333 9.86e-13 57.8
Eupl8g00822 . 39 161 Lipid Metabolism gene family AT4G25140 68.293 1.90e-51 159.0
Eupl1g01856 . 1 261 Lipid Metabolism gene family AT1G07420 83.582 1.66e-167 462.0
Eupl2g01080 . 10 98 Lipid Metabolism gene family AT4G29470 41.304 4.89e-17 72.4
Eupl11g01436 . 1 166 Lipid Metabolism gene family AT3G18570 49.123 8.61e-47 148.0
Eupl11g01435 . 30 154 Lipid Metabolism gene family AT3G18570 48.837 1.93e-29 108.0
Eupl11g01434 . 30 166 Lipid Metabolism gene family AT3G18570 53.901 6.39e-43 138.0
Eupl12g00421 . 1 175 Lipid Metabolism gene family AT1G15080 77.143 2.93e-92 269.0
Eupl5g00194 . 32 297 Lipid Metabolism gene family AT4G22750 27.541 1.31e-16 78.2
Eupl12g01164 . 28 159 Lipid Metabolism gene family AT4G22750 31.343 1.53e-11 62.8
Eupl12g01361 . 51 237 Lipid Metabolism gene family AT4G22750 27.411 3.40e-12 65.5
Eupl12g00746 . 3 170 Lipid Metabolism gene family AT3G22600 50.292 2.42e-45 144.0
Eupl12g00744 . 22 198 Lipid Metabolism gene family AT2G48140 51.053 8.06e-45 146.0