Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl5g00083 | ATGGTGTCAGAGCCAAGCTCTCTATATCCTTCATCTTCTAAAACAACCGAGATGGATTCTTCAGGTTTAAGGCCCTTGTCCACCATTAAAGAGAGTGTCGAGCTCAAATACATTAAGAACAAGTGCGAGTCATGGACTGGAGGTCTCCAGAGAATACTATGTATGCAAGGCGGAGATGATGACGGTAGCTACGCAAAGAATTCGGATGCCCCAGCATCAGCAATCACCTTATCAAAGCCGTTGCTCGTAGCAGCGATTCAATCCATGAAGTTGTTCGAAGGAGAGGAGTCATTAAGGATTGCAGACTTAGGTTGTGCCACCGGATACAACACGTTGGCCACGGTCGACTTGGTGGTGGAGAACTTGAGGGGAAGGTATAACCAAGAGTGTGGTTTCGAGCCTGAATTCGAGGCCTTCTTCTCTGATCTACCTTCAAATGATTTCAATTCTCTCTTCCGATCATTGCCCCCATTTACCAATAGCAAGGAACAGAAGTACTATGCAGCCGGAGTGCCGGGGTCGTTCTACAACCGCCTCTTCCCTAAGGGGAAGCTTCATGTTGCAGTTTGCTTAAGTGCCTTACACTGGCTTTCTCAGATACCGGAAACAGTGTTGGATAAGAGATCACCAGCTTGGAACAAAGGAAGAGCTTGGATTGACCGAGCGAAGGAGGAGGTCGTTGAAGCCTATGAGAAGCAATCCAAGGAGGATTTAGAAGCCTTCTTACGATGTCGAAAGGAGGAAATTGTAGAGGGAGGAATGTTGTTTATATTGATGGCTGGGAGGTCTAGTTCGCAGCGACCGGAAAACCAGTTAGGTGACCCTGACTCAAGGACCAAGCACCCTTTCACTACCTCCATGGATCAGGCATGGGAAGACCTGTTAAATGAGGGATTGATCGACCAAGAGACAAGAGACACGTTCAACATCCCTGCATACATGAGAAGCACAGATGAGGTAGAGAAGGCATTTCACCAAAGTAGTGGGTTTGAGATACAAAGACTTGAGTATCTGAGAATCCCTGAACATTCAAAGGAGAAGCAAGAAGAATGGATTAGAGATCCGGTTTCCTATGGTAGAGCCAAAGCCAACCTGGTCCGTGCAACACTCAAGCCCATGGTTGAGGCCCACCTTGGGCCCAAGCTCTCTGAGGAGTTGTTCAAGCGATTCGAGAAGAGAGTTTCTGGGGACATGGCCATGCTTCATAAGACATGCTTTTATGGTGTTATTGTTGTGTCTGCAATTAGGAAGTGA | 1254 | 47.29 | MVSEPSSLYPSSSKTTEMDSSGLRPLSTIKESVELKYIKNKCESWTGGLQRILCMQGGDDDGSYAKNSDAPASAITLSKPLLVAAIQSMKLFEGEESLRIADLGCATGYNTLATVDLVVENLRGRYNQECGFEPEFEAFFSDLPSNDFNSLFRSLPPFTNSKEQKYYAAGVPGSFYNRLFPKGKLHVAVCLSALHWLSQIPETVLDKRSPAWNKGRAWIDRAKEEVVEAYEKQSKEDLEAFLRCRKEEIVEGGMLFILMAGRSSSQRPENQLGDPDSRTKHPFTTSMDQAWEDLLNEGLIDQETRDTFNIPAYMRSTDEVEKAFHQSSGFEIQRLEYLRIPEHSKEKQEEWIRDPVSYGRAKANLVRATLKPMVEAHLGPKLSEELFKRFEKRVSGDMAMLHKTCFYGVIVVSAIRK | 417 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl5g00083 | 417 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 50 | 412 | IPR029063 | - | |
| Eupl5g00083 | 417 | Gene3D | Vaccinia Virus protein VP39 | 67 | 341 | IPR029063 | - | |
| Eupl5g00083 | 417 | Pfam | SAM dependent carboxyl methyltransferase | 86 | 413 | IPR005299 | GO:0008168(InterPro) | |
| Eupl5g00083 | 417 | PANTHER | S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN | 52 | 412 | IPR005299 | GO:0008168(InterPro)|GO:0008757(PANTHER)|GO:0032259(PANTHER) | |
| Eupl5g00083 | 417 | Gene3D | - | 52 | 398 | IPR042086 | - | |
| Eupl5g00083 | 417 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl5g00083 | K18886 | gibberellin A4 carboxyl methyltransferase [EC:2.1.1.276] |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2202425 | Eupl | Eupl4g01709 | Eupl-Chr4:32548295 | Eupl5g00083 | Eupl-Chr5:1792869 | |
| 2209489 | Eupl | Eupl12g00107 | Eupl-Chr12:3686378 | Eupl5g00083 | Eupl-Chr5:1792869 | |
| 2212593 | Eupl | Eupl6g00329 | Eupl-Chr6:5074995 | Eupl5g00083 | Eupl-Chr5:1792869 | |
| 2214726 | Eupl | Eupl1g00048 | Eupl-Chr1:1599095 | Eupl5g00083 | Eupl-Chr5:1792869 |