AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00084 ATGGAATTCCCATCTGGGCATAACAGACACCATCATAGAGATGAAGAAGATTACCCACCACCCCCACCACCATCACTACCCCACCATCATGAACACAACAGAGATGGAGAAGAGCTGCAAGAGAGGTACGGTGATATCAGATACAAAAGGCCACCGCCACCACCACAACCTGGTTTCAGCTACTCTGAACCTGGTTATCCTTCTGTCCAACACGTGTCTCATGAGTTCAACCAAGGGTTCGGATACGAGAGGCCACCACCACCACCGCAACCGCAACCTGGTTTCAGCTACTCTGAACCTGGTTATCCTTCTGTTCAACACGTTTCTCATGAGCCCAACCAAGGGTTCGGATACGAGAGGCCACCACCACCACCGCAACCTGGTTTCAACTACTTTGAACCTGGTTATCCTTCGGTTCAACACGTGTCTCATGAGCTCAACCAAGGGTTCGGACCAGACCCACATGAGTTTCACCATGAAAGTCACCAACACCATCACCATCATCAACATAATCTCCCTTCTTTCGTCCATCATCACAGCCATGAGGGTGGTTCCGAGCTGTCTAATAGACCCTCTGTTAGGGTTTTCTGCAAGGCAGAGACGGGCTACTCGCTTACCATAAGAGATGGCCACGTTATTCTGGCGCGATCCGACCAAACTGATATGTTCCAGCACTGGGTCAAAGAGGAGAAGTACAGCACCAGGGTGAAGGATGAACAGGGTTTTCCTAGTTTTGCTCTTGTGAATAAAGCTACTGGTCAGGCCATCAAGCACTCCATCGGAGCCACCCATCCAGTGCAGTTGATCCCTTACAATTCAAATGTTCTCGATGAGTCTATCCTGTGGTCAGAGAGCAAGGACTTGGGTGATAGTTTCAGAACTATAAGGATGGTAAATAACATTCGTTTGAACTTGGATGCTTTCAATGGAGATAAAAACCATGGTGGAGTGCATGATGGCACTATTGCTGTGCTTTGGGAGTGGAAGAAAGGAGATAACCAGCGATGGAAGATCATTCCCTACTCTGGGATTGGCCATGGCCTGAAATTTCCACCATTCACAAACATCTCTTTCCTTTTGATGGATTGA 1089 48.3 MEFPSGHNRHHHRDEEDYPPPPPPSLPHHHEHNRDGEELQERYGDIRYKRPPPPPQPGFSYSEPGYPSVQHVSHEFNQGFGYERPPPPPQPQPGFSYSEPGYPSVQHVSHEPNQGFGYERPPPPPQPGFNYFEPGYPSVQHVSHELNQGFGPDPHEFHHESHQHHHHHQHNLPSFVHHHSHEGGSELSNRPSVRVFCKAETGYSLTIRDGHVILARSDQTDMFQHWVKEEKYSTRVKDEQGFPSFALVNKATGQAIKHSIGATHPVQLIPYNSNVLDESILWSESKDLGDSFRTIRMVNNIRLNLDAFNGDKNHGGVHDGTIAVLWEWKKGDNQRWKIIPYSGIGHGLKFPPFTNISFLLMD 362
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00084 362 Gene3D - 195 339 - -
Eupl5g00084 362 MobiDBLite consensus disorder prediction 1 104 - -
Eupl5g00084 362 MobiDBLite consensus disorder prediction 1 19 - -
Eupl5g00084 362 PANTHER RICIN B-LIKE LECTIN EULS3 124 341 IPR040249 -
Eupl5g00084 362 MobiDBLite consensus disorder prediction 27 48 - -
Eupl5g00084 362 MobiDBLite consensus disorder prediction 82 96 - -
Eupl5g00084 362 SUPERFAMILY Ricin B-like lectins 191 342 IPR035992 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00084 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2214727 Eupl Eupl1g00049 Eupl-Chr1:1634033 Eupl5g00084 Eupl-Chr5:1822027