Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl5g00089 | ATGGCTGAGCTTCTGAGCAAAAGCAATCTGTTTTCTCCTTCGTGTGCACACCATCTCTGTATCTCTTCTTCTCCCAAGAACTTATCACCTTCTTTCGTTACTGGGTTTCCTTCTCTGAAACTCCAACCTCTCAAATCTTCCTCCAACTCTGACTTTCATGGCCGTAGAATCGTTCTTCCACAAGTGGAGAGAGAACCAAGAAGAGGAAATCTCCAAGCTTTTTCTGCTCAGATGAGCCTTTGTATTGGGAAAGCTCAGAAATGGTGGGTTAAGGGGATTCAGCCCAACATGAAGGAGATAACTTCAGCACAAGATCTTGTTGGTTCCTTATTAAACGCAGGAGATAAACTAGTTATTTTGGATTTCTTCTCTCCTGGTTGTGGAGGCTGCAAAGCTCTTCATCCAAAGATCTGTCAATTTGCAGAGATGAATCCAGATGTTCAGTTCCTTCAGGTGAACTATGAGGAGCACAAATCCATGTCTTATAGCCTTAATGTCCATGTTCTACCCTTCTTCAGGTTTTACAGAGGAGCCCATGGTCGTCTCTGCAGCTTTAGCTGCACCAACGCCACTATCAAGAAATTCAAAGATGCACTGGCCAAGCACACCACAGAGCGGTGCAGCCTTGGGCCACCAAAAGGGCTGGAGGAATCAGAGCTTCTAGCCTTGGCTGCAAACAAAGATCTCTCCTTCAACTACACACCAAAGCTCCCAGCAAGGGAACTAGTGTCTCTCCCTGCTGTACAAGAAGAGATAAAACATCCAGCTTATGCAAACATAAAGCTCCCTCTTCCTTCATCCTCAAAAGCTAACAAAGACTCCGAGGAGAAAACCTTGGTCACAGCTGGGAGATGA | 855 | 45.5 | MAELLSKSNLFSPSCAHHLCISSSPKNLSPSFVTGFPSLKLQPLKSSSNSDFHGRRIVLPQVEREPRRGNLQAFSAQMSLCIGKAQKWWVKGIQPNMKEITSAQDLVGSLLNAGDKLVILDFFSPGCGGCKALHPKICQFAEMNPDVQFLQVNYEEHKSMSYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTTERCSLGPPKGLEESELLALAANKDLSFNYTPKLPARELVSLPAVQEEIKHPAYANIKLPLPSSSKANKDSEEKTLVTAGR | 284 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl5g00089 | 284 | Pfam | Thioredoxin | 111 | 179 | IPR013766 | - | |
| Eupl5g00089 | 284 | MobiDBLite | consensus disorder prediction | 270 | 284 | - | - | |
| Eupl5g00089 | 284 | ProSiteProfiles | Thioredoxin domain profile. | 65 | 253 | IPR013766 | - | |
| Eupl5g00089 | 284 | SUPERFAMILY | Thioredoxin-like | 86 | 202 | IPR036249 | - | |
| Eupl5g00089 | 284 | PANTHER | THIOREDOXIN, MITOCHONDRIAL | 33 | 249 | - | GO:0009507(PANTHER)|GO:0045454(PANTHER) | |
| Eupl5g00089 | 284 | CDD | TRX-family | 113 | 177 | - | - | |
| Eupl5g00089 | 284 | FunFam | Thioredoxin-like 1-2, chloroplastic | 86 | 204 | - | - | |
| Eupl5g00089 | 284 | Gene3D | Glutaredoxin | 89 | 201 | - | - | |
| Eupl5g00089 | 284 | MobiDBLite | consensus disorder prediction | 263 | 284 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl5g00089 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2202108 | Eupl | Eupl4g01113 | Eupl-Chr4:17008674 | Eupl5g00089 | Eupl-Chr5:1926317 | |
| 2202792 | Eupl | Eupl5g00089 | Eupl-Chr5:1926317 | Eupl9g00396 | Eupl-Chr9:10408232 | |
| 2214728 | Eupl | Eupl1g00053 | Eupl-Chr1:1708996 | Eupl5g00089 | Eupl-Chr5:1926317 | |
| 2216650 | Eupl | Eupl11g00792 | Eupl-Chr11:10164457 | Eupl5g00089 | Eupl-Chr5:1926317 | |
| 2219209 | Eupl | Eupl4g01112 | Eupl-Chr4:16996696 | Eupl5g00089 | Eupl-Chr5:1926317 |