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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00124 ATGGAGTTCTTAGAGAACCCCAGAATCGAGATTGTGGGTATTGCTGTAACGCTCGTTGCCATTGGCGCTGGTGTCGCTTATTTCTATTTCACCAAGAAACCCAAAGGTTGCTTAGACCCTGAGAACTTCAGGAATTTCAAACTCGTTAAGCGCACCCAGCTCAGCCATAATGTTGCCAAGTTCCGATTTGCTCTTCCTACACCTACTTCAGTGTTAGGTCTTCCAATTGGACAACATATAAGTTGCAGGGGAAAGGATAGCCTTGGTGAAGAAGTTATCAAACCTTATACCCCAACAACTTTGGATTCAGATGTTGGGTACTTTGAACTAGTTATAAAGATGTATCCACAAGGGCGGATGTCTCACCATTTCCGGGAGATGCTTGTAGGTGATTACATGGCTGTAAAGGGACCCAAGGGGCGTTTCAAGTATCAACCTGGCCAAGTTAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGCATTACTCCAATGTTCCAAGTTGCTAGAGCCATATTGGAAAACCCAAAAGACACAACCAAGGTACATCTTATTTATGCCAACGTCACATATGAGGACATTCTTTTGAAGGAAGAGCTGGATAGCCTTGCTAGTAACTACCCTGGCCGTTTCAAAGTTTACTATGTTCTGAATCAGCCTCCTGAAGTTTGGAACGGAGGGGTTGGTTTCGTATCCAAGGAAATGATTCAAACCCACTGCCCAGCACCAGCACCTGATATCAAGATTTTGAGGTGCGGCCCACCACCCATGAACAAGGCCATGGCTGCTCATATCGATAACCTCGGGTACACACCAGAGATGCAGTTCCAGTTCTGA 834 45.92 MEFLENPRIEIVGIAVTLVAIGAGVAYFYFTKKPKGCLDPENFRNFKLVKRTQLSHNVAKFRFALPTPTSVLGLPIGQHISCRGKDSLGEEVIKPYTPTTLDSDVGYFELVIKMYPQGRMSHHFREMLVGDYMAVKGPKGRFKYQPGQVRAFGMLAGGSGITPMFQVARAILENPKDTTKVHLIYANVTYEDILLKEELDSLASNYPGRFKVYYVLNQPPEVWNGGVGFVSKEMIQTHCPAPAPDIKILRCGPPPMNKAMAAHIDNLGYTPEMQFQF 277
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00124 277 FunFam NADH-cytochrome b5 reductase 135 277 - -
Eupl5g00124 277 Pfam Oxidoreductase NAD-binding domain 154 260 IPR001433 GO:0016491(InterPro)
Eupl5g00124 277 CDD cyt-b5-reduct-like 46 277 - -
Eupl5g00124 277 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 41 145 IPR017927 GO:0016491(InterPro)
Eupl5g00124 277 FunFam NADH-cytochrome b5 reductase 36 135 - -
Eupl5g00124 277 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 247 255 IPR001709 GO:0016491(InterPro)
Eupl5g00124 277 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 191 202 IPR001709 GO:0016491(InterPro)
Eupl5g00124 277 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 153 172 IPR001709 GO:0016491(InterPro)
Eupl5g00124 277 SUPERFAMILY Riboflavin synthase domain-like 34 146 IPR017938 -
Eupl5g00124 277 Gene3D - 136 277 IPR039261 -
Eupl5g00124 277 PANTHER NADH-CYTOCHROME B5 REDUCTASE 17 277 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Eupl5g00124 277 Gene3D Translation factors 34 135 - -
Eupl5g00124 277 Pfam Oxidoreductase FAD-binding domain 46 144 IPR008333 -
Eupl5g00124 277 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 273 IPR039261 -
Eupl5g00124 277 PRINTS Cytochrome B5 reductase signature 153 172 - -
Eupl5g00124 277 PRINTS Cytochrome B5 reductase signature 94 101 - -
Eupl5g00124 277 PRINTS Cytochrome B5 reductase signature 247 255 - -
Eupl5g00124 277 PRINTS Cytochrome B5 reductase signature 130 144 - -
Eupl5g00124 277 PRINTS Cytochrome B5 reductase signature 72 83 - -
Eupl5g00124 277 PRINTS Cytochrome B5 reductase signature 191 202 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00124 K00326 cytochrome-b5 reductase [EC:1.6.2.2]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2197821 Eupl Eupl1g00079 Eupl-Chr1:2709547 Eupl5g00124 Eupl-Chr5:3153973
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Eupl11g01183 . 81 276 NADPH P450 reductases gene family AT5G17770 23.923 5.86e-07 48.1
Eupl13g01251 . 40 273 NADPH P450 reductases gene family AT5G17770 38.672 4.91e-47 167.0
Eupl1g00079 . 35 281 NADPH P450 reductases gene family AT5G17770 85.02 3.89e-160 444.0
Eupl5g00124 . 35 281 NADPH P450 reductases gene family AT5G17770 85.02 4.54e-161 447.0
Eupl10g00608 . 39 281 NADPH P450 reductases gene family AT5G17770 39.847 3.06e-64 202.0
Eupl10g00954 . 7 120 NADPH P450 reductases gene family AT1G60660 61.404 1.86e-47 146.0
Eupl8g00163 . 1 134 NADPH P450 reductases gene family AT5G53560 80.597 3.78e-82 235.0
Eupl14g00089 . 1 134 NADPH P450 reductases gene family AT5G53560 78.358 1.60e-79 229.0
Eupl7g00028 . 6 132 NADPH P450 reductases gene family AT5G48810 46.099 3.29e-38 125.0
Eupl7g00087 . 6 59 NADPH P450 reductases gene family AT1G26340 48.148 7.35e-14 65.1
Eupl10g00586 . 39 281 NADPH P450 reductases gene family AT5G17770 39.847 8.93e-65 204.0
Eupl7g00484 . 1 134 NADPH P450 reductases gene family AT2G32720 80.597 1.61e-82 236.0
Eupl13g01240 . 40 273 NADPH P450 reductases gene family AT5G17770 39.062 1.32e-47 169.0