AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00132 ATGGCAACGAGAACTTTGAGAAGAAGGCTCCATCATGGGGATGTTGATGGGAGAAAGCATGATCATTTGGAGAGCTCAGGATTGGATGGCTTAAATGAACCGTTACTAGGGAGCTGTGAGTATGATGATAGGTGCTCAGAGGAATACGCTTCAGGAGACCTCTGGGATGATGACAGAAGAAAGGAACGCCTCCATTGGACATTTCTTTTTTCCCACGTGATCGCTCAATGGGCACAATGGTTAGCAAATATCGTCCTTGGATCTGTATCACTTCTTGGAAGGCTTTTACCTCTTTCTTCCACAACACATAATCGCCAAGACAAGAACGTTGCACTTCCTCTTAGTCCTTTACAGGCAGAAAGACTGAGAAATCTACAGCAAAGGTTGGCAGTTCCCTTCGATGGCACTTGTGTGGAACATCAAGATGCGCTTAAGCAACTTTGGAGGCTGGCTTATCCTGATAGAGAACTCCCATCTCTTAAATCAGAACTTTGGAAGGAGATGGGTTGGCAAGGTTCTGACCCTTCAACAGATTTTAGGGGTGGTGGATTTATATCACTGGAGAATCTTATCTTTTTTGCCAAGAAATATCCGGAATCATTCCGGAGACTTTTGTATAAACAAGAAGGGAGGAGAGCAGAGTGGGAGTATCCCTTTGCTGTAGCAGGCATCAATATATCCTTTATGTTGGCTCAAATGTTGGATCTGCAGTCAGGCAAGCCTAGTTCTTTGGCAGGAATCCGATTCTTAGAACTTCTTAGAGAAGATGAAATGGCATTTGATAACTTGTACTGCATAGCGTTTCAGATGATGGATGCTCAGTGGCTTGTGAAGCACGCTTCTTATATGGAATTCAATGAGGTTCTGAAGTCTACAAGAACACAGATCGAACGCGAGCTCGCTCTTGAAGATGTCTCCACTGTGAAAGATTTACCGGCATATAACCTATTGAACGGATAG 960 43.96 MATRTLRRRLHHGDVDGRKHDHLESSGLDGLNEPLLGSCEYDDRCSEEYASGDLWDDDRRKERLHWTFLFSHVIAQWAQWLANIVLGSVSLLGRLLPLSSTTHNRQDKNVALPLSPLQAERLRNLQQRLAVPFDGTCVEHQDALKQLWRLAYPDRELPSLKSELWKEMGWQGSDPSTDFRGGGFISLENLIFFAKKYPESFRRLLYKQEGRRAEWEYPFAVAGINISFMLAQMLDLQSGKPSSLAGIRFLELLREDEMAFDNLYCIAFQMMDAQWLVKHASYMEFNEVLKSTRTQIERELALEDVSTVKDLPAYNLLNG 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00132 319 ProSiteProfiles ELMO domain profile. 139 300 IPR006816 -
Eupl5g00132 319 PANTHER ENGULFMENT AND CELL MOTILITY 111 317 IPR050868 -
Eupl5g00132 319 Pfam ELMO-CED-12 family 124 289 IPR006816 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00132 K23538 ELMO domain-containing protein
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr2:1111382 Eupl5g00132 Eupl-Chr5:3380455 dispersed
Eupl Eupl-Chr5:3380455 Eupl6g00865 Eupl-Chr6:13990800 dispersed
Eupl Eupl-Chr1:2894815 Eupl5g00132 Eupl-Chr5:3380455 wgd