AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl5g00170 ATGGCGGAGAATAGAGAAGCATTGTTGAAGAAAGTGTACTATGAGAACTGCCCGGGTTGCAAGGTTGATCAACTTAACGAGACGCGGCCCGGAATACCATTCAAGGATTTCTTCTATATGGGGATTGTGGTACTCTCGGCTGCTTTGCCAATATCATCTCTCTTTCCATTCTTATACTTCATGATAAGAGATTTCCATATTGCGAAGAGGGAGGAAGACATTGGTTACTATGCAGGTTATGTGGGTGAGCATAGTTTAAGCCTTTATATTGATGGATCATCATTTATGTTTGGAAGAGCTTTGACTTCTGTTTTCTGGGGAGTCGTAGCAGATAGATATGGTCGAAAACCTGTTATAATGATCGGTACTATTACAGTGGTTTTGTTCAACACTCTCTTTGGTCTCAGTACAAGCTTTTGGATGGCAGTTTCTATGAGGTTTCTTCTTGGAAGTTTGAATGGTCTACTCGGCCCAATAAGGGCTTATGCTTGCGAAATTTGCCGAAAAGAATATCAAGCTTTCGGATTGTCAATTGTTAGTACAGCATGGGGCATAGGTTTGGTCATTGGTCCGGCTCTTGGAGGTTTCCTTTCACAGCCTGCGGAGAAATATCCAAATATATTTTCTAAAGGATCTCTATTTGAGAGGTTTCCATACTTCTTACCCTGCCTCTGTATATCAGTCTTTGCAGTGACTGGATCTATTGCTTGTTCTCGGCTTCCGGAAACATTGCACATGCATAATGGCAACAATAAAAAAGGGTCCAACTCATATGAGGCTTTACCGTTTGACTGCGATGTGAAAGAGGAGATTCAAGAGACTGATGCAAGAGGACCAGATCCTAAGGAAAACCTCTTAAAGAATTGGCCGTTAATTTCATCAATCATTGTTTATTGTGTTTTCCAACTTCATGATATGGCCTACACAGAGATATTCTCATTATGGGCTGTCAGTCCTAGAAAGTATGGGGGATTGAGCTATAAAACTCAGGATGTTGGTGAAGTTCTGGCAATATCAGGCTTTGGTCTTTTACTCTTTCAACTTTTTCTATATCCAATGGTAGAAAAGATTCTTGGGGCTGTTGTGGTATCTCGCATTGCAGCGGTTATATCTGTCCCATTGCTATCAAGCTATCCCTTTATTGCTATATTATCTGGGTTCAGCCTTTCACTTTTACTAAATTGTGCATCTCTTTCGAAGAATGTTCTCTCTGTGTCCATTACCACTGGGTTATTCCTCTTACAAAACAGGGCTGTGGCCCAGCACCAAAGAGGAGCTGCAAATGGCATTTCTATGACTGCAATGTCTCTTTTCAAAGCAGCTGGTCCAGTTGGAGGTGGTGCTCTCTTTGCTTGGGCACAAAAGCGTCAAAATGCATCCTTCCTCCCAGGTGATCAAATGGTTTTCTTCATCTTAAATGTGATTGAGGTGATTGGATTGCTACTGACCTTCAAACCGTTTCTAGCTCAACCACATGAGAAGACTACAGAGGCGATATTGAGTTAG 1506 41.7 MAENREALLKKVYYENCPGCKVDQLNETRPGIPFKDFFYMGIVVLSAALPISSLFPFLYFMIRDFHIAKREEDIGYYAGYVGEHSLSLYIDGSSFMFGRALTSVFWGVVADRYGRKPVIMIGTITVVLFNTLFGLSTSFWMAVSMRFLLGSLNGLLGPIRAYACEICRKEYQAFGLSIVSTAWGIGLVIGPALGGFLSQPAEKYPNIFSKGSLFERFPYFLPCLCISVFAVTGSIACSRLPETLHMHNGNNKKGSNSYEALPFDCDVKEEIQETDARGPDPKENLLKNWPLISSIIVYCVFQLHDMAYTEIFSLWAVSPRKYGGLSYKTQDVGEVLAISGFGLLLFQLFLYPMVEKILGAVVVSRIAAVISVPLLSSYPFIAILSGFSLSLLLNCASLSKNVLSVSITTGLFLLQNRAVAQHQRGAANGISMTAMSLFKAAGPVGGGALFAWAQKRQNASFLPGDQMVFFILNVIEVIGLLLTFKPFLAQPHEKTTEAILS 501
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl5g00170 501 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 35 483 - -
Eupl5g00170 501 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 31 485 - -
Eupl5g00170 501 SUPERFAMILY MFS general substrate transporter 35 486 IPR036259 -
Eupl5g00170 501 Gene3D MFS general substrate transporter like domains 35 484 IPR036259 -
Eupl5g00170 501 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 491 IPR020846 GO:0022857(InterPro)
Eupl5g00170 501 CDD MFS-SLC46-TetA-like 42 485 - -
Eupl5g00170 501 Pfam Major Facilitator Superfamily 42 443 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl5g00170 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr1:3841632 Eupl5g00170 Eupl-Chr5:4394936 dispersed
Eupl Eupl-Chr1:3912382 Eupl5g00170 Eupl-Chr5:4394936 dispersed
Eupl Eupl-Chr1:3729318 Eupl5g00170 Eupl-Chr5:4394936 wgd