Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl5g00179	ATGGAACTCTCTTCTCCCTTCAAACATCTTCTCTCAGGAAAACCTCACTCCTCACATTCGTCCAATCTTTCCTTTTCTTCCTCTTTATCCCCTTTTCATCTCGAAAATGCTAATTCCAGAAAACCAATTTCGTCAAATTTCTGCGTTTTTGCCATTGCCATAAACCCCCAAGAACTCCCCCAGAGCAGCCCTCAGAGGCTTCTCAAAGAGCTCTCAGAGCGTAAAAAGATCATCTTTCCGAAGAAAAAAATTCCCCCGAAAAGATTCATCCTCAAACCCCCCTTAGATGATGCCAAATTAGCCGAAAGATTTCTCAACAGTCCTCAGTTGTCCCTCAAATCCTTCCCTCTATTGAGCTCTTGCTTGCCTTCCTCTCGCCTCAACAATGCCGACAAGACGTGGATGGATGAGTACCTCCTGGAAGCCAAGCAAGCCCTTGGGTACCCCCTCGAGGCTTCCGATCGCTTTGGCGATGAGCATCCTGCTAAGCAATTTGATACCTTGTTGTACTTGGCCTTCCAGCACCCATCGTGCGAGAGGACGAATACTAGGCATGTGCGGTCTGGGCATTCGAGGCTGTCGTTTCTGGGGCAATATGTGCTCGAATTGGCGATTGCTGAGTACTTCTTGCAGCGGTATCCAAGAGAATCGCCAGCCCCGATGAGGGAGAGGGTGTTTGGCTTGATTGGGAAGAGATTTTTACCCAAGTGGATTAAAGCTGCTAGCTTGCATAATTTGGTTTTCCCCTTTGATGAGATGGATAAGTTGATTCGGAAGGAGCGAGAACCCCCTGCGAAGTCTGTATTCTGGGCTTTGTTTGGGGCAATTTATCTGTGCTTTGGCATGCCAGAAGTATATCGTGTTCTTTTTGAGGTATTTGCAATGGACCCAGAAGATGAGAGCTGCCAGCCAAAATTACGGAGGCAGCTTGAAGATGTTGATTATGTTTCCGTAGAATTTGAAGGCAAAAAGCTTGCTTGGCAAGATGTTGCTGCATATAAGCCTCCAGAAGATTCCCTTTTTGCACACCCGAGGCTTTTTAGAGCATGTGTTCCTCCAGGTATGCATCGGTTTCGAGGGAACATTTGGGATTATGAGAGCAGACCCCAAGTCATGCAGACATTGGGTTATCCCTTGCAGATGGCTGATAGAATTCCCGACATAACTCAGGCTAGGAACATTGAACTTGGACTTGGGCTTCAGCTATGTTTCTTGCACCCATCGAAATACAAGTTTGAGCATCCTCGGTTTTGCCTTGAACGATTGGAATATGTCGGCCAAAAGATCCAGGATCTTGTTATGGCTGAAAGGTTGCTGATGAAGCATCTTGATGCTCCCGGAAAATGGTTACAGGAGAAGCATCGCCGTCTTCTGCTCAATAAGTTCTGTGGGAGGTATTTGCGGGACAAGAACCTCCACCGTTTCATCATATGTGGTGAGCAGGTCCAGGACTCGTACGAACACAACCGAAGACTAAGGAACCCGGCTACTACTGCGGTTCAACAAGCCATCCATGGACTCTCTTATACTGTGTATGGGAAACCAGATGTGAGACGCCTTATGTTTGAGGTTTTTGACTTTGAGCAGATCCAGCCGAAAGCAGTTTGA	1608	47.08	MELSSPFKHLLSGKPHSSHSSNLSFSSSLSPFHLENANSRKPISSNFCVFAIAINPQELPQSSPQRLLKELSERKKIIFPKKKIPPKRFILKPPLDDAKLAERFLNSPQLSLKSFPLLSSCLPSSRLNNADKTWMDEYLLEAKQALGYPLEASDRFGDEHPAKQFDTLLYLAFQHPSCERTNTRHVRSGHSRLSFLGQYVLELAIAEYFLQRYPRESPAPMRERVFGLIGKRFLPKWIKAASLHNLVFPFDEMDKLIRKEREPPAKSVFWALFGAIYLCFGMPEVYRVLFEVFAMDPEDESCQPKLRRQLEDVDYVSVEFEGKKLAWQDVAAYKPPEDSLFAHPRLFRACVPPGMHRFRGNIWDYESRPQVMQTLGYPLQMADRIPDITQARNIELGLGLQLCFLHPSKYKFEHPRFCLERLEYVGQKIQDLVMAERLLMKHLDAPGKWLQEKHRRLLLNKFCGRYLRDKNLHRFIICGEQVQDSYEHNRRLRNPATTAVQQAIHGLSYTVYGKPDVRRLMFEVFDFEQIQPKAV	535

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl5g00179	535	Pfam	Ribonuclease III domain	192	279	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	ProSiteProfiles	Ribonuclease III family domain profile.	168	281	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	SUPERFAMILY	RNase III domain-like	400	526	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	PANTHER	RIBONUCLEASE III	25	492	-	GO:0003725(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0006396(PANTHER)\|GO:0010468(PANTHER)
	Eupl5g00179	535	Gene3D	Ribonuclease III domain	392	528	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	Gene3D	Ribonuclease III domain	163	296	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	SMART	riboneu5	167	304	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	CDD	RIBOc	167	301	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	SUPERFAMILY	RNase III domain-like	134	305	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Eupl5g00179	535	MobiDBLite	consensus disorder prediction	1	20	-	-
	Eupl5g00179	535	FunFam	Ribonuclease III domain-containing protein RNC1, chloroplastic	164	295	-	-
	Eupl5g00179	535	FunFam	Ribonuclease III domain-containing protein RNC1, chloroplastic	392	528	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl5g00179	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Eupl	Eupl-Chr1:4069716	Eupl5g00179	Eupl-Chr5:4756452	dispersed
	Eupl	Eupl-Chr5:4572649	Eupl5g00179	Eupl-Chr5:4756452	proximal