Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl5g00190 | ATGAGCAGCATAGGAACTGGTTATGACCTCTCCGTCACCACATTCTCACCCGACGGTCGCGTGTTCCAGATCGAATACGCCGCCAAAGCAGTCGATAACAGTGGGACTGTTGTTGGGATCAAATGCAAGGATGGGATTGTTATGGGTGTAGAGAAGCTCATAGCATCCAAGATGATGTTGTCGGGTTCGAATCGGAGAATCCACGCCGTTCATCGCCACTCCGGCATGGCTGTGGCTGGTTTAGCAGCTGATGGGAGACAAATTGTTGCACGAGCCAAGTCCGAAGCGACCAACTATGAAAGGGTTTATGGGGAACCCATACCTGTGAAGGAACTTGCCGATCGTGTTGCTAGTTATGTTCATCTATGCACACTCTATTGGTGGCTTAGACCATTTGGATGTGGAGTAATTCTAGGAGGTTATGACAGAGATGGACCACAACTATACATGATTGAACCTTCTGGTATTTCCTATAGGTATTTTGGTGCTGCAATCGGAAAGGGAAGGCAGGCTGCTAAAACGGAGATCGAAAAGTTGAAGCTTTCTGAAATAACCTGTAGGGAAGGGGTTATTGAAGTTGCCAAGATCATTTACGGAGTACATGATGAAGCAAAGGACAAGGCATTTGAATTGGAAATGAGCTGGGTTTGTGACGAGTCGAACCGCCTACACCAGAAGGTCCCAGATGAGCTTTTAGAGGCAGCAAAGGCAGCAGCCAAAGCGGCACTAGAAGAAATGGATGCTGACTGA | 750 | 47.73 | MSSIGTGYDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLSGSNRRIHAVHRHSGMAVAGLAADGRQIVARAKSEATNYERVYGEPIPVKELADRVASYVHLCTLYWWLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGRQAAKTEIEKLKLSEITCREGVIEVAKIIYGVHDEAKDKAFELEMSWVCDESNRLHQKVPDELLEAAKAAAKAALEEMDAD | 249 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl5g00190 | 249 | ProSitePatterns | Proteasome alpha-type subunits signature. | 8 | 30 | IPR000426 | GO:0006511(InterPro)|GO:0019773(InterPro) | |
| Eupl5g00190 | 249 | Gene3D | Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 | 1 | 249 | IPR029055 | - | |
| Eupl5g00190 | 249 | ProSiteProfiles | Proteasome alpha-type subunit profile. | 23 | 236 | IPR023332 | - | |
| Eupl5g00190 | 249 | SUPERFAMILY | N-terminal nucleophile aminohydrolases (Ntn hydrolases) | 3 | 242 | IPR029055 | - | |
| Eupl5g00190 | 249 | SMART | Proteasome-A-N-2 | 8 | 30 | IPR000426 | GO:0006511(InterPro)|GO:0019773(InterPro) | |
| Eupl5g00190 | 249 | Pfam | Proteasome subunit | 31 | 216 | IPR001353 | GO:0005839(InterPro)|GO:0051603(InterPro) | |
| Eupl5g00190 | 249 | FunFam | Proteasome subunit alpha type | 1 | 249 | - | - | |
| Eupl5g00190 | 249 | Pfam | Proteasome subunit A N-terminal signature | 8 | 30 | IPR000426 | GO:0006511(InterPro)|GO:0019773(InterPro) | |
| Eupl5g00190 | 249 | CDD | proteasome-alpha-type-3 | 5 | 216 | - | - | |
| Eupl5g00190 | 249 | PANTHER | PROTEASOME SUBUNIT ALPHA-BETA | 6 | 225 | IPR050115 | GO:0005634(PANTHER)|GO:0010498(PANTHER)|GO:0019773(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl5g00190 | K02727 | 20S proteasome subunit alpha 7 [EC:3.4.25.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr5:5086877 | Eupl9g00704 | Eupl-Chr9:15882369 | dispersed | |
| Eupl | Eupl-Chr1:4382424 | Eupl5g00190 | Eupl-Chr5:5086877 | wgd | |
| Eupl | Eupl-Chr10:32511135 | Eupl5g00190 | Eupl-Chr5:5086877 | wgd |