Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl8g00818 | ATGGATATCGAGCAGAAACAAGCGGAGCTGATCGAGCACTTCGTCAAGCAAGCAGAGAATCACAAAGGGGCATCGCTCTCGAGTGTAATCGTCGAAGCGACGTCGCATTCCTCTCTATTCGCGTTTTCTGAGATTCTATCGGTTCCTAACGTCGTCGAGCTTCAAGGGACTGACTATTCTGTATTTCTTGATGTGCTCCGTTTGTTTGCTCATGGCACATGGAAAGATTACAAGAGTAATGTTGGCTGTCTTCCGCCTCTGGTACCCGATCAAGTCCGCAAGCTAAAGCAACTTAGTGTTCTTACGCTGGCAGAGACAACTAAGGTACTCCTCTATGATCAATTGATGCAAGAACTAGATGTTTCAAATGTACGTGAACTTGAAGACTTTCTTATCAATGAGTGCATGTATGCGGGCATAGTTCGTGGAAAGCTGGATCAGCTGCAAAGATGCTTTGAGGTGCAATTTGCAGCGGGAAGGGATTTGAGACCGGGACAGCTTGGGAGTATGATACAGACATTATCAAGCTGGTTAGCTACTTCAGACAATGTACTTCTCTCAATCCAAGAGAAGATAAAATGGGCAGATACAATGACTGAGTTGGAAAAGAAACATCGAAAGGAAGTCGTAGACAGGGTGGAAGAAGTGAAGAAGTCCCTCTACCTTAAGGCAGACATTGACTTCCAAGGGAACGAGGAGTTCCTGTACTCTGAACCTGGTGGAATGATGGACTATGAGGAAGATCGAAGCCGACCAAAGAGATGCTCGGTGGTACGATGGATGACCTTGGGGGTGTGCTGGAGTCAATGCGCATCAGGGACCAGACTCGAGGGACACACCTGTTTTCACTCGTGCTCTTGGATGTGGATCTCGAAAATCAAACGGCCACAAAGGCAAGTCCCCTGA | 906 | 47.13 | MDIEQKQAELIEHFVKQAENHKGASLSSVIVEATSHSSLFAFSEILSVPNVVELQGTDYSVFLDVLRLFAHGTWKDYKSNVGCLPPLVPDQVRKLKQLSVLTLAETTKVLLYDQLMQELDVSNVRELEDFLINECMYAGIVRGKLDQLQRCFEVQFAAGRDLRPGQLGSMIQTLSSWLATSDNVLLSIQEKIKWADTMTELEKKHRKEVVDRVEEVKKSLYLKADIDFQGNEEFLYSEPGGMMDYEEDRSRPKRCSVVRWMTLGVCWSQCASGTRLEGHTCFHSCSWMWISKIKRPQRQVP | 301 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl8g00818 | 301 | Pfam | PCI domain | 84 | 155 | IPR000717 | - | |
| Eupl8g00818 | 301 | ProSiteProfiles | PCI domain profile. | 1 | 159 | IPR000717 | - | |
| Eupl8g00818 | 301 | Pfam | CSN7 helical bundle subdomain | 12 | 43 | - | - | |
| Eupl8g00818 | 301 | PANTHER | COP9 SIGNALOSOME COMPLEX SUBUNIT 7-DENDRITIC CELL PROTEIN GA17 | 6 | 219 | IPR045237 | GO:0008180(PANTHER) | |
| Eupl8g00818 | 301 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 86 | 177 | IPR000717 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl8g00818 | K12180 | COP9 signalosome complex subunit 7 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr14:28779775 | Eupl8g00818 | Eupl-Chr8:23429299 | wgd |