AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl8g00851 ATGGAGAGTAATAATTCGAGGAGGCTTGCGATTCAAATAGAAAATCCATTTGCTTTGAAGGTGGGTCAAGTCTTCACTGGCTTTGGCATCGGCTGTGGTGTTGGTATTGGCGTTGGTCGCCCTTTAAACTTAGGTGCAATACCAGCGCTGCAACAAGTTATGAGTGCTACCAGTGGTGCAACAAATGCTTTTTCTGGTGTTGGGAGATATATGAACAGTGCCTTGAGAAGGTTTGGAGCGAAGAACATCGAAGTGGGTATTGGATGTGGAGTTGGTTTTGGCCATGGTTTTGGAGTTGGCCTTGCTGTAAAGCCTGGTGTAGTCCATCATATTCAATCATGTATTGGACAAGCAACGGCAAAGATGATGAAGAAGTTTGGAAATGTTCCCGGCTTATCTGTTGGTCAAAGTATGCTTCCAGGGTCCTTGCAAAGCAGCATGAGCATGATAAATGGGACCTCCATGCAAAACCCGGTTGGAGATATCATGCAGTCATCAATAAAAACTCCGGAACATACATCTCAAGGCCTCTCCAGGGATGGAAGTTTAAATACGGGATCTCAATATGAACCTTTTATGTCTAAAGGAACTCCACTGGATGCATCCCTTGGCAGTCACTCTGAAAAGGATATCAGCAATTTCTTGCAGAATCCAGTTTTGAAAGGCGAGGACATGAAGTTTAATGAATTGGCCAAGCAATTACGTTCAGAAAACAATGTTCTTCAGATGGTATTGAAACACCAGCAAGTCATCGAAAATCTGATGGAGGAGAATGAGAAGCTTCGTCAGATACTCGTAGAAGAGCTAAAAGTCCCACCAAGCAGGCTAGAAACCAGTAACATAAGTAGAACTAAATCTCAAACCCCATGCTCCTATTGTTTTGAATGCCGTAGAAGACAGAGAAAACTTAGATGA 915 43.17 MESNNSRRLAIQIENPFALKVGQVFTGFGIGCGVGIGVGRPLNLGAIPALQQVMSATSGATNAFSGVGRYMNSALRRFGAKNIEVGIGCGVGFGHGFGVGLAVKPGVVHHIQSCIGQATAKMMKKFGNVPGLSVGQSMLPGSLQSSMSMINGTSMQNPVGDIMQSSIKTPEHTSQGLSRDGSLNTGSQYEPFMSKGTPLDASLGSHSEKDISNFLQNPVLKGEDMKFNELAKQLRSENNVLQMVLKHQQVIENLMEENEKLRQILVEELKVPPSRLETSNISRTKSQTPCSYCFECRRRQRKLR 304
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl8g00851 304 MobiDBLite consensus disorder prediction 169 192 - -
Eupl8g00851 304 PANTHER DYNAMIN 2 302 - -
Eupl8g00851 304 Coils Coil 244 271 - -
Eupl8g00851 304 MobiDBLite consensus disorder prediction 169 197 - -
Eupl8g00851 304 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl8g00851 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:19830960 Eupl8g00851 Eupl-Chr8:24275628 dispersed
Eupl Eupl-Chr14:22615852 Eupl8g00851 Eupl-Chr8:24275628 dispersed
Eupl Eupl-Chr8:24275628 Eupl8g00861 Eupl-Chr8:24482120 transposed