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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl8g00910 ATGTCTAAAGAAGTGTATCTGGAGGTTAGGAGGAGAAAATGGCTCGAAGATAACCCAGAATCATCGAATAATGATGATCCTGTAGTCTTCGACACCTCCATTATACCTTGGTGGTCATGGGTCAAGAGATTCCATCTTCCTGAAGCTGAATTACTTAATGGCCGTGCCGCAATGATAGGGTTCTTCATGGCATATCTGGTGGATAGCTTGACTGGGGTAGGTCTTGTCGACCAAATGGGGAACTTCTTCTGCAAAACTCTCTTATTTGTTGCTGTAGTTGGAGTACTTCTGATCCGAAAGAACGAAGATATAGAAACTCTAAAGAAGCTTCTGGAAGAAACAACCTTCTACGACAAGCAGTGGCAAGCAACCTGGCAGGACGAGACCACTAGTAGCTCCAAGAAAGACTAG 411 44.28 MSKEVYLEVRRRKWLEDNPESSNNDDPVVFDTSIIPWWSWVKRFHLPEAELLNGRAAMIGFFMAYLVDSLTGVGLVDQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLLEETTFYDKQWQATWQDETTSSSKKD 136
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl8g00910 136 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 17 100 - -
Eupl8g00910 136 SUPERFAMILY Chlorophyll a-b binding protein 13 84 - -
Eupl8g00910 136 Gene3D Chlorophyll a-b binding protein domain 13 95 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl8g00910 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Eupl Eupl-Chr14:24569231 Eupl8g00910 Eupl-Chr8:25634620 dispersed
Eupl Eupl-Chr8:25634620 Eupl8g00911 Eupl-Chr8:25655782 tandem