AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Eupl8g01365 | ATGGCTGGTAGCAGCGGAGGAGGGGAGAATAGAAATAGAGAAACATGGAAGGCGCATGGGGCAATGACGATGGTGCAGATTTTCAATGGGGGATACCACGTCATAACCAAGGTGGCTCTCAATGCCGGCATGAATCAGGTCGTCTTCTGCGTATTTCGTGATGTCCTTGGCCTCTTCATCCTCCTCCCCCTGGCCTACTTCCGGGAGAAAAGTGTTCGACCACCGATAACTAGACACTTCCTCCTCTCCTTCTTTTTTCTTGGGTTAACTGGGATATTTGGCAACCAGCTTTTATTTCTAATCGGTCTTAGCTACACAAATCCTACTTATGCTGCAGCCATACAGCCTGCAATACCAGTCTTCACATTTATTTTGGCTGTAATAATGGGTACAGAAACTGTTAATTTGCTCAGAATTGAAGGCCAGGTGAAGGTTGCAGGCACACTCATCTGCATTTCTGGAGCTGTATTAATGGTTCTGTTCAGAGGTCCAGTTCTATTTGGGTTCAGTGAATTGGGGCTCGCAGCAGAAAACAAGATAATTGTGAATGCTCAATCAGAGCCTGCTGGATGGTTAATATCTAGTTTGATGGAGTTTGGGCTGACAAGGTGGAACATTGGTGTGTTGTGCTTAATAGGAAACTGTATGTGCATGGCACTTTTTCTAGCCATACAGGCTCCACTTTTGACGAAGTATCCTGCCAGTCTATCAGTGACAGCATATTCATACTTTTTCGGTGCTCTTTGTATGGTAATAACGGGTTTGTTTTCAACCAACGATTATACCAGCTGGAGCTTGACACAGTCTGATCTAATCGCAGTCTTATATGCTGGAATTGTCACATCTGCTATTAACTATGGACTCTTGGCATGGTCCAATATGATCTTGGGGCCCGCATTGGTGGCGCTGTATAATCCCCTGCAACCTGCTGCATCAGCCTTTCTGTCAAAAATATTTCTTGGAAGCCCTATTTATCTGGGAAGCATCATAGGGGGTTCTTTAATCATTGCTGGTCTTTACATGGTCACCTGGGCATCCTACAGAGATAGACGAGCGGCTGTTGGGATCATCACTAACGTAAGTCAGGCTTCTGAACCGCTTCTCCATAAGGACCCACCACTCAACAAGACTTCGTACCAGAAAGGACACATTTTCTCCGGGACCTCCACCACATTACCCAAGTCCTTGGATTGA | 1194 | 45.73 | MAGSSGGGENRNRETWKAHGAMTMVQIFNGGYHVITKVALNAGMNQVVFCVFRDVLGLFILLPLAYFREKSVRPPITRHFLLSFFFLGLTGIFGNQLLFLIGLSYTNPTYAAAIQPAIPVFTFILAVIMGTETVNLLRIEGQVKVAGTLICISGAVLMVLFRGPVLFGFSELGLAAENKIIVNAQSEPAGWLISSLMEFGLTRWNIGVLCLIGNCMCMALFLAIQAPLLTKYPASLSVTAYSYFFGALCMVITGLFSTNDYTSWSLTQSDLIAVLYAGIVTSAINYGLLAWSNMILGPALVALYNPLQPAASAFLSKIFLGSPIYLGSIIGGSLIIAGLYMVTWASYRDRRAAVGIITNVSQASEPLLHKDPPLNKTSYQKGHIFSGTSTTLPKSLD | 397 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Eupl8g01365 | 397 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 53 | 162 | - | - | |
| Eupl8g01365 | 397 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 245 | 348 | - | - | |
| Eupl8g01365 | 397 | MobiDBLite | consensus disorder prediction | 379 | 397 | - | - | |
| Eupl8g01365 | 397 | PANTHER | WAT1-RELATED PROTEIN | 21 | 357 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
| Eupl8g01365 | 397 | MobiDBLite | consensus disorder prediction | 378 | 397 | - | - | |
| Eupl8g01365 | 397 | Pfam | EamA-like transporter family | 27 | 158 | IPR000620 | GO:0016020(InterPro) | |
| Eupl8g01365 | 397 | Pfam | EamA-like transporter family | 206 | 343 | IPR000620 | GO:0016020(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Eupl8g01365 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Eupl | Eupl-Chr7:6180576 | Eupl8g01365 | Eupl-Chr8:34769573 | dispersed | |
| Eupl | Eupl-Chr8:1336145 | Eupl8g01365 | Eupl-Chr8:34769573 | dispersed | |
| Eupl | Eupl-Chr8:34769573 | Eupl4g00780 | Eupl-Chr4:12041248 | dispersed | |
| Eupl | Eupl-Chr14:28073820 | Eupl8g01365 | Eupl-Chr8:34769573 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Eupl11g00441 | . | 8 | 389 | Nodulin-like gene family | AT2G39210 | 65.375 | 1.97e-178 | 508.0 | |
| Eupl11g00440 | . | 416 | 566 | Nodulin-like gene family | AT2G39210 | 72.848 | 2.06e-72 | 226.0 | |
| Eupl11g01210 | . | 3 | 356 | Nodulin-like gene family | AT3G18200 | 67.877 | 0.0 | 505.0 | |
| Eupl11g00761 | . | 107 | 562 | Nodulin-like gene family | AT4G19180 | 26.638 | 1.43e-41 | 157.0 | |
| Eupl11g00560 | . | 12 | 268 | Nodulin-like gene family | AT5G40240 | 47.471 | 5.13e-68 | 213.0 | |
| Eupl11g00559 | . | 20 | 273 | Nodulin-like gene family | AT5G40240 | 47.49 | 6.24e-65 | 214.0 | |
| Eupl5g00296 | . | 3 | 396 | Nodulin-like gene family | AT5G07050 | 67.005 | 0.0 | 523.0 | |
| Eupl3g01381 | . | 3 | 81 | Nodulin-like gene family | AT5G64700 | 68.354 | 7.08e-32 | 112.0 | |
| Eupl3g01378 | . | 1 | 342 | Nodulin-like gene family | AT1G68170 | 44.444 | 1.51e-100 | 300.0 | |
| Eupl4g02091 | . | 16 | 344 | Nodulin-like gene family | AT1G75500 | 35.866 | 5.04e-68 | 218.0 | |
| Eupl8g01318 | . | 1 | 569 | Nodulin-like gene family | AT4G19450 | 64.86 | 0.0 | 698.0 | |
| Eupl8g01365 | . | 9 | 353 | Nodulin-like gene family | AT5G45370 | 62.873 | 1.73e-167 | 471.0 | |
| Eupl1g01426 | . | 8 | 409 | Nodulin-like gene family | AT2G39210 | 58.706 | 4.65e-157 | 459.0 | |
| Eupl1g01427 | . | 1 | 566 | Nodulin-like gene family | AT2G39210 | 69.014 | 0.0 | 799.0 | |
| Eupl13g01501 | . | 3 | 350 | Nodulin-like gene family | AT5G64700 | 48.276 | 2.93e-107 | 317.0 | |
| Eupl13g01477 | . | 115 | 198 | Nodulin-like gene family | AT3G43660 | 67.857 | 3.29e-32 | 108.0 | |
| Eupl13g01476 | . | 3 | 84 | Nodulin-like gene family | AT1G21140 | 75.61 | 2.14e-38 | 125.0 | |
| Eupl13g01475 | . | 9 | 198 | Nodulin-like gene family | AT3G43660 | 70.707 | 1.88e-97 | 280.0 | |
| Eupl1g00182 | . | 3 | 393 | Nodulin-like gene family | AT5G07050 | 65.075 | 0.0 | 517.0 | |
| Eupl4g01835 | . | 2 | 193 | Nodulin-like gene family | AT3G43660 | 23.868 | 2.69e-07 | 47.8 | |
| Eupl4g00784 | . | 18 | 359 | Nodulin-like gene family | AT5G40240 | 47.619 | 1.91e-103 | 307.0 | |
| Eupl4g00783 | . | 116 | 348 | Nodulin-like gene family | AT5G40240 | 52.361 | 2.13e-82 | 249.0 | |
| Eupl4g00782 | . | 17 | 354 | Nodulin-like gene family | AT5G40240 | 49.263 | 3.06e-106 | 314.0 | |
| Eupl4g00781 | . | 23 | 358 | Nodulin-like gene family | AT5G40240 | 47.23 | 1.42e-97 | 300.0 | |
| Eupl4g00780 | . | 18 | 140 | Nodulin-like gene family | AT5G40230 | 45.528 | 6.87e-21 | 86.7 | |
| Eupl4g00779 | . | 18 | 361 | Nodulin-like gene family | AT5G40240 | 50.43 | 3.48e-108 | 319.0 | |
| Eupl4g00616 | . | 108 | 561 | Nodulin-like gene family | AT4G19180 | 38.086 | 5.35e-113 | 352.0 | |
| Eupl4g00269 | . | 9 | 579 | Nodulin-like gene family | AT5G14120 | 74.368 | 0.0 | 866.0 | |
| Eupl4g00906 | . | 6 | 532 | Nodulin-like gene family | AT1G74780 | 62.569 | 0.0 | 666.0 | |
| Eupl10g00080 | . | 1 | 363 | Nodulin-like gene family | AT4G30420 | 49.614 | 1.50e-129 | 375.0 | |
| Eupl12g00166 | . | 27 | 305 | Nodulin-like gene family | AT4G01440 | 29.749 | 2.94e-43 | 152.0 | |
| Eupl12g00167 | . | 27 | 331 | Nodulin-like gene family | AT3G30340 | 34.098 | 3.98e-61 | 198.0 | |
| Eupl1g00994 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 59.923 | 0.0 | 883.0 | |
| Eupl8g00875 | . | 14 | 98 | Nodulin-like gene family | AT4G34950 | 84.706 | 3.45e-41 | 142.0 | |
| Eupl10g00826 | . | 16 | 98 | Nodulin-like gene family | AT4G34950 | 85.542 | 4.99e-41 | 142.0 | |
| Eupl8g00046 | . | 9 | 337 | Nodulin-like gene family | AT3G30340 | 51.652 | 9.29e-133 | 382.0 | |
| Eupl8g00045 | . | 3 | 345 | Nodulin-like gene family | AT5G64700 | 46.398 | 3.33e-95 | 286.0 | |
| Eupl8g00043 | . | 21 | 346 | Nodulin-like gene family | AT5G07050 | 41.667 | 1.25e-90 | 276.0 | |
| Eupl13g00340 | . | 1 | 389 | Nodulin-like gene family | AT1G75500 | 74.872 | 0.0 | 585.0 | |
| Eupl13g00855 | . | 17 | 92 | Nodulin-like gene family | AT1G21140 | 64.474 | 6.49e-27 | 103.0 | |
| Eupl3g01388 | . | 1 | 355 | Nodulin-like gene family | AT1G25270 | 41.304 | 1.20e-99 | 299.0 | |
| Eupl3g01385 | . | 1 | 342 | Nodulin-like gene family | AT1G68170 | 44.505 | 7.54e-100 | 298.0 | |
| Eupl14g00019 | . | 9 | 351 | Nodulin-like gene family | AT3G30340 | 50.862 | 3.57e-129 | 374.0 | |
| Eupl5g01338 | . | 7 | 344 | Nodulin-like gene family | AT2G39510 | 63.609 | 4.72e-155 | 441.0 | |
| Eupl5g02211 | . | 1 | 740 | Nodulin-like gene family | AT4G19180 | 58.945 | 0.0 | 880.0 | |
| Eupl5g02293 | . | 1 | 499 | Nodulin-like gene family | AT2G30300 | 49.625 | 1.78e-161 | 466.0 | |
| Eupl7g00187 | . | 16 | 341 | Nodulin-like gene family | AT3G18200 | 37.615 | 4.77e-73 | 228.0 | |
| Eupl7g00188 | . | 27 | 338 | Nodulin-like gene family | AT3G30340 | 33.013 | 5.83e-58 | 190.0 | |
| Eupl7g00275 | . | 11 | 286 | Nodulin-like gene family | AT3G30340 | 31.884 | 2.20e-47 | 160.0 | |
| Eupl3g00252 | . | 16 | 198 | Nodulin-like gene family | AT3G43660 | 72.251 | 2.56e-97 | 280.0 | |
| Eupl10g00356 | . | 7 | 408 | Nodulin-like gene family | AT1G80530 | 61.614 | 0.0 | 521.0 | |
| Eupl10g00354 | . | 7 | 561 | Nodulin-like gene family | AT1G80530 | 62.105 | 0.0 | 721.0 | |
| Eupl10g00355 | . | 7 | 408 | Nodulin-like gene family | AT1G80530 | 61.614 | 0.0 | 521.0 | |
| Eupl14g01255 | . | 7 | 353 | Nodulin-like gene family | AT5G45370 | 65.229 | 5.76e-174 | 487.0 | |
| Eupl3g02545 | . | 16 | 98 | Nodulin-like gene family | AT4G34950 | 86.747 | 8.62e-42 | 143.0 | |
| Eupl3g02186 | . | 16 | 565 | Nodulin-like gene family | AT4G34950 | 69.052 | 0.0 | 795.0 | |
| Eupl3g02023 | . | 1 | 389 | Nodulin-like gene family | AT1G75500 | 75.448 | 0.0 | 589.0 | |
| Eupl9g00925 | . | 6 | 359 | Nodulin-like gene family | AT1G21890 | 30.899 | 1.12e-51 | 174.0 | |
| Eupl9g00924 | . | 108 | 274 | Nodulin-like gene family | AT1G75500 | 27.811 | 1.54e-10 | 58.5 | |
| Eupl9g01368 | . | 7 | 561 | Nodulin-like gene family | AT1G80530 | 62.872 | 0.0 | 727.0 | |
| Eupl7g00491 | . | 14 | 44 | Nodulin-like gene family | AT5G64700 | 61.29 | 9.72e-07 | 45.1 | |
| Eupl3g00358 | . | 7 | 360 | Nodulin-like gene family | AT1G21890 | 62.147 | 5.78e-161 | 456.0 | |
| Eupl5g01687 | . | 2 | 571 | Nodulin-like gene family | AT2G28120 | 69.723 | 0.0 | 833.0 | |
| Eupl5g01686 | . | 1 | 565 | Nodulin-like gene family | AT2G39210 | 66.549 | 0.0 | 773.0 | |
| Eupl5g01685 | . | 13 | 565 | Nodulin-like gene family | AT2G39210 | 71.248 | 0.0 | 815.0 | |
| Eupl13g00978 | . | 16 | 98 | Nodulin-like gene family | AT4G34950 | 85.542 | 4.69e-41 | 142.0 | |
| Eupl12g00554 | . | 26 | 348 | Nodulin-like gene family | AT5G07050 | 40.867 | 1.73e-87 | 268.0 | |
| Eupl13g01431 | . | 4 | 198 | Nodulin-like gene family | AT3G43660 | 66.995 | 1.16e-93 | 270.0 | |
| Eupl13g01463 | . | 75 | 198 | Nodulin-like gene family | AT3G43660 | 66.917 | 1.98e-57 | 175.0 | |
| Eupl13g01462 | . | 3 | 68 | Nodulin-like gene family | AT1G21140 | 68.182 | 2.57e-24 | 88.6 | |
| Eupl13g01461 | . | 5 | 198 | Nodulin-like gene family | AT3G43660 | 69.802 | 4.73e-98 | 281.0 | |
| Eupl14g00961 | . | 18 | 364 | Nodulin-like gene family | AT5G47470 | 50.43 | 6.04e-121 | 351.0 | |
| Eupl12g01298 | . | 4 | 366 | Nodulin-like gene family | AT1G09380 | 57.851 | 7.31e-157 | 444.0 |