AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli14g01558 ATGGCTGGCAATGGCCTATCAAACTTAGGCCGTGTGAAGCTCACAGACTTGATAGCTTCTGAAGGACTTCCTTCTGATACATACAAACTATCAGTCTCAACTTTGTCACAATCACTTGCTCAATATTCGGCCGCCATCATCCAATTTCCAGCAAATGATGGTGCTCTTTTGAGATGTTGCCTGGAATCTGCTCGACCATACTTTCATCAAAAACCCTCATACGCATCTGCTGATATGATTCACATTAATGATTCCCGTGAATGGTGTAAAACATCAGGATACTCAGCAGATCCCCAAATGTGGCAAGAAAGTTATGATTACAGGCCAGGAATAACTCCCACAGAACCCAACAGTGACATTGAATTCCCTCCTGCTGGGTTAGCTGACATATTTGTTCTACTTGCAAAAGCAGCCCGTGGCGTACTTGATGCAGTTAGTTTCTATTTAAATCTACGTGGCTGTGCCTTCACTGAAATACTTGATAGTGTTCCCTTGAGAAATCGGGAAATATCATCTTCGGTTCTATCAGTTAATTGTCATGCAAGGCCCTCTTTTCAAGGAGCTCAACACCATAACTTAACAACCCAAGAAGACGGGCAATTAGTTATGTTCTCAGACCATGATCAACAAGTTGACAAAAGTGTAGTATCTATAATAAAATCCGATAAAGCCGGCTTTCATATTAGAGATTTTAATGGTCGTTGGGTGCTTGTGGATGGTGATCTTGGTCCTCAAGAAGCGGTTGTGTACCCTGGACTGGCTTTGTATCATGCTACTGCTGGCTATGTTAGCCCTGCATTGCATAGAACTGATATTAGTAACTTACATGGTAACATGTATGGGCGGTGCTCACTCTCTTTTAAACTCATGCCTAAATCCATGACTAGCCTTAGTTGTTCAGAGATGAGAGCTGCTGGTCATGGTGTTGAAGCTCAGTTCCAGATTCCAGTATCAGTTGATGACTTTATGCAGAGATCACATCCGTTGGATCAACTCTTTAACAGAAACAGTTTCCCAAGTTTTAGTTTTCCTACAGCCCAAGAAGGATCTGTGAAACCCTTGATGAAGAGAAAGAAGACCAATTCTAGGTTGAAACCGTTGCCACCTTCCAAAAGGTTACGGCTTGAAGCTCAAAGAGTTCTTAAAGAGAGAGTTCAGGATATAGCTGATAAGAAAGGCATCAAGCTCAGATTCTGCACATTGAAGGAATGTGAGAGTCACATTCACTCACTTGACAGTCCATGTGGCAACATACGATTGGAGATTGGGTGGCCCCCGGGTGTGCCATTTGTTCATCCCCATGACCTACCCAACAAAGCAAAGATTGGATTTCTTGAAACATATGAACCTGGTTGGTCAGCCAATCATGATATGGAGCTGAGTTTGATTGAAACTGGACAGCCAAGTCAGCATGCTGATAACTAA 1425 42.74 MAGNGLSNLGRVKLTDLIASEGLPSDTYKLSVSTLSQSLAQYSAAIIQFPANDGALLRCCLESARPYFHQKPSYASADMIHINDSREWCKTSGYSADPQMWQESYDYRPGITPTEPNSDIEFPPAGLADIFVLLAKAARGVLDAVSFYLNLRGCAFTEILDSVPLRNREISSSVLSVNCHARPSFQGAQHHNLTTQEDGQLVMFSDHDQQVDKSVVSIIKSDKAGFHIRDFNGRWVLVDGDLGPQEAVVYPGLALYHATAGYVSPALHRTDISNLHGNMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVEAQFQIPVSVDDFMQRSHPLDQLFNRNSFPSFSFPTAQEGSVKPLMKRKKTNSRLKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCTLKECESHIHSLDSPCGNIRLEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWSANHDMELSLIETGQPSQHADN 474
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli14g01558 474 SUPERFAMILY Clavaminate synthase-like 97 302 - -
Fli14g01558 474 Gene3D - 25 328 IPR027443 -
Fli14g01558 474 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 472 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli14g01558 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr14:48187130 Fli2g02087 Fli-Chr2:38049653 dispersed