AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00098 ATGGCCACCGCAAAGCCCACCGGCCGTACGATCTCTCAACAAGCTTTCGACGAAATGGTGAAAGAAAACATAGACGATTTAGGTATGGAGCCAACGGAAGCCCTAAGCGACGCAATCGAAACGCTAACACTTCAAGGCGTAGATCTCTCCGGTATCGTTACCGATACACTCCCCGGAGAAACTAATCCGGTGATCCAATCGCTTGATCGAATTAAACAGTTGCAATGTTCGGATTGGAGCGATGAGGCGGTGGTAGATGAGGTTCTAGGGTTGTTGGATGGTTTGATTGGAATGTGTCGTGGTGAGGGGTCTGGAAGTGGTGCAATTGCTGCGAGAAATGGAGGTGTGGAGTTGATGTGTTCTGTTTGCTCGAAAGTTGGTGATGGTGGCCGTGATTCAGTGCTTGTATCGGCTTTAGATGCGTTGGCTGTGTTTGTTCATGATCTTCAAAGTACAGAAGCTTTTAGGCAAAATGGAGGACCAAAAATGTTGGTTGAGATCCTAACCAATGACACTCAAAATGTGAAAATCTTGAACAGTGGTTTATCTGTTGTTGCTGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCCTTTGTCGAGCTACACATAGATGAATTAATGGTTTCAATCATGAAGAAACATACCAAGGGGAACATTCCCAGTTTATATGATGCTATTAGAGTGCTTTTGGCTGCTGATGATAACCGTGTAGTGGCCTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAACTGGAATTGCTGAAGCTCTTGTGGAGTCATTAAAGGATGGAATTAGCTCACCAGGTCTTGTATCAGCAACAATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGATCGGTTGCTGAAAATGGTGGCATAGATTCATTGCTCATTTGTATTGATGAATCTGGTTTACAAGGGAATAAAATTGTGGCTAAAGCTTGTTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAAAGTGCCATTGTTGAAAGAGGAGGGCTGAATAGACTCATCACACTGTCTAGCAGGCTTGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACTATTATATGCACCCTGTGTTTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATTCAATCGATGCAAAAGTTCCCTCACTCGTATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCCAGGAATCCAGAAAACAGGCCTGTTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAAAGCCACAAAAGTTGTAGAGATGCAGCCATTGCCGCCCTTAGAGATTTGGGGCTTGAAAACTACAATTCTTAG 1389 43.34 MATAKPTGRTISQQAFDEMVKENIDDLGMEPTEALSDAIETLTLQGVDLSGIVTDTLPGETNPVIQSLDRIKQLQCSDWSDEAVVDEVLGLLDGLIGMCRGEGSGSGAIAARNGGVELMCSVCSKVGDGGRDSVLVSALDALAVFVHDLQSTEAFRQNGGPKMLVEILTNDTQNVKILNSGLSVVAAASTGNEVIKESFVELHIDELMVSIMKKHTKGNIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKTGIAEALVESLKDGISSPGLVSATIALKAVAVNDEICRSVAENGGIDSLLICIDESGLQGNKIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPHSYQLQKNSCLMIRNLVARNPENRPVLLSNGIEKIIRNAKESHKSCRDAAIAALRDLGLENYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00098 462 SUPERFAMILY ARM repeat 117 456 IPR016024 -
Fli1g00098 462 PANTHER UNCHARACTERIZED 6 456 - -
Fli1g00098 462 Gene3D - 65 462 IPR011989 -
Fli1g00098 462 SMART arm-5 148 190 IPR000225 GO:0005515(InterPro)
Fli1g00098 462 SMART arm-5 418 457 IPR000225 GO:0005515(InterPro)
Fli1g00098 462 SMART arm-5 285 329 IPR000225 GO:0005515(InterPro)
Fli1g00098 462 SMART arm-5 330 372 IPR000225 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00098 K24166 armadillo repeat-containing protein 6