Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fli1g00154 | ATGCATCTTCTCCTTCACCCTTCTCCAACCCTCTGTTCTTACTCCAACCACTGTCCTCCGCCGCACCGCCACCACCAATTCCGAACAACCCACCGGAATAACCTTCGATACCTCAAATCGATCGGCATCATCCCACCGGAATCCACCACCACCCCCTCTCCAACCACCGTCTCTCACATCCTCTCAACCATCAACTTCTTCAAATCCAAAGGCTTCTCAGAACCCGACTTCACCCGAATCGCTTATCTCTCGCCACATATCTTCGCTCTATCTTACAATCCCGAATCCATCGAGCCAGTTTTCGAATTCTTAACGGTCGAATTAGCTGCCTCAGTGGAGGATATCCGTGGGTTGATTATCAAATGCCCTCACATTCTTGAATCAGACCCTGAATTCTGCTTAAAACCGACACTCGAGTACCTTAAAAGCTTGGGGATTAAGGGGTTGAACAATCCCACAACTTTGAATGCTCATTTACTGAACACAAGAGTGCATAAGTTTGAAGAGAAGATGGGATTTTTGCATGGATTTGGGTTCTCTGAGGCCGAATCGAGGCGAATTTGTGGGCGGTTTCCGGCGATATTTGGGTATGGGATTATGAACAATTTGAGGCCAAAGTTTGTGTATTTGGTGAGGGAGATGAAGAGGAATGGTAGGGAGGAAGTGTGCAAGTTTCCACAGTATTTTGGGTTCAGTTTGGAGAAGAGGATAAAGGTTAGACATTTGCATTTGAAACAGAGGAATGTTGATGGTGAGGTGCCTTTGAATAGGATGTTGTTGTGGAGTGATGAGAGGTTTTTCAAGAAATGGAAATGA | 816 | 45.96 | MHLLLHPSPTLCSYSNHCPPPHRHHQFRTTHRNNLRYLKSIGIIPPESTTTPSPTTVSHILSTINFFKSKGFSEPDFTRIAYLSPHIFALSYNPESIEPVFEFLTVELAASVEDIRGLIIKCPHILESDPEFCLKPTLEYLKSLGIKGLNNPTTLNAHLLNTRVHKFEEKMGFLHGFGFSEAESRRICGRFPAIFGYGIMNNLRPKFVYLVREMKRNGREEVCKFPQYFGFSLEKRIKVRHLHLKQRNVDGEVPLNRMLLWSDERFFKKWK | 271 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fli1g00154 | 271 | Pfam | mTERF | 93 | 266 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | SMART | mt-12 | 78 | 111 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | SMART | mt-12 | 185 | 217 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | SMART | mt-12 | 219 | 250 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | SMART | mt-12 | 116 | 147 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | SMART | mt-12 | 152 | 180 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | PANTHER | CGI-12 PROTEIN-RELATED | 59 | 269 | IPR003690 | GO:0003690(InterPro)|GO:0006355(InterPro) | |
| Fli1g00154 | 271 | Gene3D | Transcription termination factor 3, mitochondrial | 31 | 271 | IPR038538 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fli1g00154 | K15031 | mitochondrial transcription termination factor family protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fli | Fli-Chr17:48666434 | Fli1g00154 | Fli-Chr1:3073403 | dispersed | |
| Fli | Fli-Chr1:3073403 | Fli2g02754 | Fli-Chr2:56411646 | transposed |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Fli | mTERF | 1e-32 | No_clan | TR | mTERF |