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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00159 ATGCCAATTTATTTCGCGGTTAATGATCCTTCAACAACTCCTCGATTGTTAACACAAGAACAATCCGACTCCATACCATTTTCCTCCAAAAAGCTCGCATATCTTTTAGAACTTACATCATTATCCGAGGGTTCACCCCAAGCTCTAGCCATGGAGCAAACACTCAAACAGTGTGAGCTCGAGGCAACCCCTGGTGAAACGAGGTTCTGTGCTAGCTCGTTAGAGTCCATGCTGGACTCTACACACGAGATATTGGGTACGGTCAAATTAAAAGCGTTGACCACCAATATCCATAATTTATCAAATACCCTTTTGCAAGAGTACACCTTTTTGAAGGAGCCAGTGGAGATTAATGTTTCTGACATGGTGGCATGTCACACCATGGCTTATCCTTATGCTGTTTTTTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATATAGTGGATGCTATCGCTGTTTGCCACATGGACACTTCGATGTGGGATAGTGACCACGTGGCGTTTCGTGTGCTCGGAGGCCACCCTGGCAGCTCGCCAGTGTGTCATTTTCTCCCAGCCGATAACATTGTGTGGATACCGTCACCATAG 621 44.77 MPIYFAVNDPSTTPRLLTQEQSDSIPFSSKKLAYLLELTSLSEGSPQALAMEQTLKQCELEATPGETRFCASSLESMLDSTHEILGTVKLKALTTNIHNLSNTLLQEYTFLKEPVEINVSDMVACHTMAYPYAVFYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSMWDSDHVAFRVLGGHPGSSPVCHFLPADNIVWIPSP 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00159 206 ProSiteProfiles BURP domain profile. 1 205 IPR004873 -
Fli1g00159 206 Pfam BURP domain 1 203 IPR004873 -
Fli1g00159 206 SMART BURP-2 1 205 IPR004873 -
Fli1g00159 206 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 1 205 IPR044816 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00159 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
88330 Fli1g00159 Fli4g01203
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fli Fli-Chr14:64181261 Fli1g00159 Fli-Chr1:3233982 dispersed
Fli Fli-Chr1:3233982 Fli4g01203 Fli-Chr4:77639622 dispersed
Fli Fli-Chr1:3193631 Fli1g00159 Fli-Chr1:3233982 proximal