AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fli1g00195 ATGCGGTCATCCATGACAGTTACAAGCCCTAGCTTCCCACCATTGCCCCAATTCCACCAATCGAACACCCATCACCAACCATACAAACAACCACCAATGATTACACTTCAAAACCCATCAAAACCCCATGATTTTGCCGCAAAATCCCTGAAAAATTCAGGGTTTTTATCGGCAATTGGGAACGCGATTGAAGAACAAGAGTATCGTAAAGCAAGGGCTGAAGTTGTTCGAAAAGGAACGGGGTTAGAGGGTTACAACATCGAGGGTTTTTCTATTGGTGGTCATGAGACTTGTGTTATTATTCCTGAATTCAAGTGTGCGTTTGATATCGGAAGGTGTCCCCCCAGAGCTGTTGCCATGAATTTCTTGTTTATTACTCATGCTCATCTTGATCACATTGGTGGGCTACCTATGTATGTGGCAACTCGCGGTTTATACAGCATGAGTCCTCCAACTGTCTTTGTACCTCCTTCCATTAAAGAAGATGTTGAAAATTTGATTGAGCTTCACAGGAAGATGGGTGATGTGGAATTAAATCTTGATTTGGTTGCATTGGATGTAGGAGAAACGTATGAGCTAAGAAACGATCTTGTCGTGCGCCCATTTAAAACTCATCACGTAATACCAAGTCAGGGTTATGTGATTTACTCAGTTCGTAAGAAACTGAAAAAGCAATACATGCACTTAAAAGGAAGGGAGATTGAGAAAAAGAAGAAATCTGGTGTTGAGATAACAGATATCATATTGTCACCAGAAGTGGCATTCACTGGCGATACAAGTTCTGATTTTCTACTTGATCCACGAAGTTCTGATGCCTTGAGAGCCAAAATTCTCATAACTGAGGCTACTTTCTTGGATGACAAATGCGACATTGAGCATGCACGAGAACATGGTCACATGCATATTGACGAGATCATCGAGCATTCTAAGTGGATTAGGAACAAGGCAATTCTTTTGACTCATTTCTCATCGCGGTACCACATTGAGGAAATTCGCCAAGCTGTGACTAAGTTGCAAGCAAAGGTTTCAGCCAAAGTGGTACCACTTACAGAAGGTTTTAGATCATTGTACTCACCATGA 1080 41.76 MRSSMTVTSPSFPPLPQFHQSNTHHQPYKQPPMITLQNPSKPHDFAAKSLKNSGFLSAIGNAIEEQEYRKARAEVVRKGTGLEGYNIEGFSIGGHETCVIIPEFKCAFDIGRCPPRAVAMNFLFITHAHLDHIGGLPMYVATRGLYSMSPPTVFVPPSIKEDVENLIELHRKMGDVELNLDLVALDVGETYELRNDLVVRPFKTHHVIPSQGYVIYSVRKKLKKQYMHLKGREIEKKKKSGVEITDIILSPEVAFTGDTSSDFLLDPRSSDALRAKILITEATFLDDKCDIEHAREHGHMHIDEIIEHSKWIRNKAILLTHFSSRYHIEEIRQAVTKLQAKVSAKVVPLTEGFRSLYSP 359
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fli1g00195 359 MobiDBLite consensus disorder prediction 1 37 - -
Fli1g00195 359 Pfam Beta-lactamase superfamily domain 119 322 IPR001279 -
Fli1g00195 359 PANTHER TRNASE Z TRZ1 46 353 - -
Fli1g00195 359 Gene3D - 85 353 IPR036866 -
Fli1g00195 359 SUPERFAMILY Metallo-hydrolase-oxidoreductase 120 335 IPR036866 -
Fli1g00195 359 MobiDBLite consensus disorder prediction 1 40 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fli1g00195 K00784 ribonuclease Z [EC:3.1.26.11]